DF172_ARATH
ID DF172_ARATH Reviewed; 84 AA.
AC P82774;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 29-MAR-2004, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Defensin-like protein 172;
DE AltName: Full=Low-molecular-weight cysteine-rich protein 60;
DE Short=Protein LCR60;
DE Flags: Precursor;
GN Name=LCR60; OrderedLocusNames=At2g20208; ORFNames=F11A3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000305};
RN [1] {ECO:0000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000269|PubMed:10617197};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3] {ECO:0000305}
RP IDENTIFICATION.
RX PubMed=11437247; DOI=10.1023/a:1010664704926;
RA Vanoosthuyse V., Miege C., Dumas C., Cock J.M.;
RT "Two large Arabidopsis thaliana gene families are homologous to the
RT Brassica gene superfamily that encodes pollen coat proteins and the male
RT component of the self-incompatibility response.";
RL Plant Mol. Biol. 46:17-34(2001).
RN [4]
RP GENE FAMILY.
RX PubMed=15955924; DOI=10.1104/pp.105.060079;
RA Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.;
RT "Genome organization of more than 300 defensin-like genes in Arabidopsis.";
RL Plant Physiol. 138:600-610(2005).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}.
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DR EMBL; AC006569; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002685; AEC06981.1; -; Genomic_DNA.
DR RefSeq; NP_001031377.1; NM_001036300.2.
DR AlphaFoldDB; P82774; -.
DR SMR; P82774; -.
DR BioGRID; 528285; 1.
DR PaxDb; P82774; -.
DR PRIDE; P82774; -.
DR EnsemblPlants; AT2G20208.1; AT2G20208.1; AT2G20208.
DR GeneID; 3767924; -.
DR Gramene; AT2G20208.1; AT2G20208.1; AT2G20208.
DR KEGG; ath:AT2G20208; -.
DR Araport; AT2G20208; -.
DR TAIR; locus:1009023195; AT2G20208.
DR HOGENOM; CLU_196273_0_0_1; -.
DR InParanoid; P82774; -.
DR OMA; QNMGCTA; -.
DR OrthoDB; 1597752at2759; -.
DR PhylomeDB; P82774; -.
DR PRO; PR:P82774; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; P82774; baseline and differential.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR GO; GO:0031640; P:killing of cells of another organism; IEA:UniProtKB-KW.
DR InterPro; IPR039641; LCR.
DR PANTHER; PTHR36788; PTHR36788; 1.
PE 2: Evidence at transcript level;
KW Antimicrobial; Disulfide bond; Fungicide; Plant defense;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..84
FT /note="Defensin-like protein 172"
FT /id="PRO_0000017298"
FT DISULFID 27..74
FT /evidence="ECO:0000250"
FT DISULFID 34..56
FT /evidence="ECO:0000250"
FT DISULFID 40..68
FT /evidence="ECO:0000250"
FT DISULFID 44..70
FT /evidence="ECO:0000250"
SQ SEQUENCE 84 AA; 8914 MW; 2146CD48C5D230CB CRC64;
MAKASSTLVL SIIFLVMFAL VEQNMGCTAT MGPCEKDKSC SATCRATFGD RANGFCDYST
STSPGGECTC VYHCPPVVPH ESHL