DF180_ARATH
ID DF180_ARATH Reviewed; 127 AA.
AC P82772;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Putative defensin-like protein 180;
DE AltName: Full=Putative low-molecular-weight cysteine-rich protein 58;
DE Short=Protein LCR58;
DE Flags: Precursor;
GN Name=LCR58; OrderedLocusNames=At5g38317; ORFNames=MSI17;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000305};
RN [1] {ECO:0000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3] {ECO:0000305}
RP IDENTIFICATION.
RX PubMed=11437247; DOI=10.1023/a:1010664704926;
RA Vanoosthuyse V., Miege C., Dumas C., Cock J.M.;
RT "Two large Arabidopsis thaliana gene families are homologous to the
RT Brassica gene superfamily that encodes pollen coat proteins and the male
RT component of the self-incompatibility response.";
RL Plant Mol. Biol. 46:17-34(2001).
RN [4]
RP GENE FAMILY.
RX PubMed=15955924; DOI=10.1104/pp.105.060079;
RA Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.;
RT "Genome organization of more than 300 defensin-like genes in Arabidopsis.";
RL Plant Physiol. 138:600-610(2005).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}.
CC -!- CAUTION: Contains 8 disulfide bonds instead of the 4 disulfide bonds,
CC which are conserved features of the family. {ECO:0000305}.
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DR EMBL; AB011481; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED94295.1; -; Genomic_DNA.
DR RefSeq; NP_001031979.1; NM_001036902.1.
DR AlphaFoldDB; P82772; -.
DR STRING; 3702.AT5G38317.1; -.
DR PaxDb; P82772; -.
DR PRIDE; P82772; -.
DR EnsemblPlants; AT5G38317.1; AT5G38317.1; AT5G38317.
DR GeneID; 3771358; -.
DR Gramene; AT5G38317.1; AT5G38317.1; AT5G38317.
DR KEGG; ath:AT5G38317; -.
DR Araport; AT5G38317; -.
DR TAIR; locus:1009023434; AT5G38317.
DR eggNOG; ENOG502SD1Z; Eukaryota.
DR HOGENOM; CLU_158287_1_1_1; -.
DR InParanoid; P82772; -.
DR OMA; CETCDER; -.
DR OrthoDB; 1411313at2759; -.
DR PhylomeDB; P82772; -.
DR PRO; PR:P82772; -.
DR Proteomes; UP000006548; Chromosome 5.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR GO; GO:0031640; P:killing of cells of another organism; IEA:UniProtKB-KW.
DR InterPro; IPR039641; LCR.
DR PANTHER; PTHR36788; PTHR36788; 1.
PE 3: Inferred from homology;
KW Antimicrobial; Disulfide bond; Fungicide; Plant defense;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..26
FT /evidence="ECO:0000255"
FT CHAIN 27..127
FT /note="Putative defensin-like protein 180"
FT /id="PRO_0000017296"
FT DISULFID 29..70
FT /evidence="ECO:0000250"
FT DISULFID 36..55
FT /evidence="ECO:0000250"
FT DISULFID 39..64
FT /evidence="ECO:0000250"
FT DISULFID 43..66
FT /evidence="ECO:0000250"
FT DISULFID 81..127
FT /evidence="ECO:0000250"
FT DISULFID 92..112
FT /evidence="ECO:0000250"
FT DISULFID 97..121
FT /evidence="ECO:0000250"
FT DISULFID 101..123
FT /evidence="ECO:0000250"
SQ SEQUENCE 127 AA; 13625 MW; 50E4B646530A52D8 CRC64;
MERITSLVFF ASFLIIFVSG VNQTRADSCD ESLGLCETCD ERCQAKHGPS CISKCDGEVG
MLSCTCTYEC GPPLPPKGNV CSGGTGMCSG KCPYKCCDTS CAQKYNGGRG FCNSFGNYNF
CQCEYPC