DGCP_PSEAB
ID DGCP_PSEAB Reviewed; 671 AA.
AC A0A0H2ZJS2;
DT 12-AUG-2020, integrated into UniProtKB/Swiss-Prot.
DT 16-SEP-2015, sequence version 1.
DT 03-AUG-2022, entry version 26.
DE RecName: Full=Diguanylate cyclase DgcP {ECO:0000303|PubMed:32080219};
DE EC=2.7.7.65 {ECO:0000250|UniProtKB:Q9HT84};
GN Name=dgcP; OrderedLocusNames=PA14_72420;
OS Pseudomonas aeruginosa (strain UCBPP-PA14).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208963;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCBPP-PA14;
RX PubMed=17038190; DOI=10.1186/gb-2006-7-10-r90;
RA Lee D.G., Urbach J.M., Wu G., Liberati N.T., Feinbaum R.L., Miyata S.,
RA Diggins L.T., He J., Saucier M., Deziel E., Friedman L., Li L., Grills G.,
RA Montgomery K., Kucherlapati R., Rahme L.G., Ausubel F.M.;
RT "Genomic analysis reveals that Pseudomonas aeruginosa virulence is
RT combinatorial.";
RL Genome Biol. 7:R90.1-R90.14(2006).
RN [2]
RP FUNCTION, INTERACTION WITH FIMV, AND SUBCELLULAR LOCATION.
RX PubMed=32080219; DOI=10.1038/s41598-020-59536-9;
RA Nicastro G.G., Kaihami G.H., Pulschen A.A., Hernandez-Montelongo J.,
RA Boechat A.L., de Oliveira Pereira T., Rosa C.G.T., Stefanello E.,
RA Colepicolo P., Bordi C., Baldini R.L.;
RT "c-di-GMP-related phenotypes are modulated by the interaction between a
RT diguanylate cyclase and a polar hub protein.";
RL Sci. Rep. 10:3077-3077(2020).
CC -!- FUNCTION: Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the
CC condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger
CC which controls cell surface-associated traits in bacteria (By
CC similarity). Localizes at the cell poles through interaction with FimV
CC where it increases the local pools of c-di-GMP (PubMed:32080219).
CC {ECO:0000250|UniProtKB:Q9HT84, ECO:0000269|PubMed:32080219}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 GTP = cyclic di-3',5'-guanylate + 2 diphosphate;
CC Xref=Rhea:RHEA:24898, ChEBI:CHEBI:33019, ChEBI:CHEBI:37565,
CC ChEBI:CHEBI:58805; EC=2.7.7.65;
CC Evidence={ECO:0000250|UniProtKB:Q9HT84};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:P31129};
CC Note=Binds 1 Mg(2+) ion per monomer. {ECO:0000250|UniProtKB:P31129};
CC -!- PATHWAY: Purine metabolism; 3',5'-cyclic di-GMP biosynthesis.
CC {ECO:0000250|UniProtKB:P31129}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane
CC {ECO:0000269|PubMed:32080219}. Note=Localizes at the cell poles in a
CC FimV-dependent manner. {ECO:0000269|PubMed:32080219}.
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DR EMBL; CP000438; ABJ14873.1; -; Genomic_DNA.
DR RefSeq; WP_003142135.1; NZ_CP034244.1.
DR AlphaFoldDB; A0A0H2ZJS2; -.
DR SMR; A0A0H2ZJS2; -.
DR EnsemblBacteria; ABJ14873; ABJ14873; PA14_72420.
DR KEGG; pau:PA14_72420; -.
DR HOGENOM; CLU_025058_0_0_6; -.
DR OMA; EACPFHF; -.
DR BioCyc; PAER208963:G1G74-6093-MON; -.
DR UniPathway; UPA00599; -.
DR Proteomes; UP000000653; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0052621; F:diguanylate cyclase activity; IEA:UniProtKB-EC.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR Pfam; PF00990; GGDEF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF55073; SSF55073; 1.
DR TIGRFAMs; TIGR00254; GGDEF; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; GTP-binding; Magnesium; Membrane;
KW Metal-binding; Nucleotide-binding; Transferase.
FT CHAIN 1..671
FT /note="Diguanylate cyclase DgcP"
FT /id="PRO_0000450452"
FT REGION 204..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 277..297
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 592
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT BINDING 549
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT BINDING 557
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT BINDING 562
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT BINDING 566
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT BINDING 592
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:P31129"
FT SITE 554
FT /note="Transition state stabilizer"
FT /evidence="ECO:0000255"
SQ SEQUENCE 671 AA; 73937 MW; 7BD3A29861FF64B8 CRC64;
MSRDDVQRWK DKYLENIEQQ ERLQRRWDAR IDLLRRGLVR SSLAAEGSDK AVDQCMKELR
EILRRDDMDA GLSGLIPRLE KAVLDSEQRR QQRTQQNIDA LGELAQQLLA LDLPRELRKP
LKQFARDIEE RARQSREIPI LLSELSRLQR QALAERKGGD AEDGRPSLLQ RLFGGKESET
AAEPSASVPS VVAASNTPIQ PAAAAPSLPV AEHDEAPGGP PQPLPASRVA AIESAPAGWV
GVAERGEPNQ ILLDEPREIW LDSLPLPAGL SFSETLEDAG AESPPAVPAD VESAPEAPAT
PVDNLDGQAV DEAYELPPPI PEPGYSAVAP HIEASLLRLL DGLSLPSSHQ PQAEALRERI
DGSLNWYELV PVLDDLAVLV LSLADSGQRD FEEYLRQLNE RLESFLGHLG DAHAGYTDVL
DNARGFDQSL REQVSGLQAS VQQATDLNSL KLAVDSRLNG LLASMDEHQR EQAEHEQEVS
GRLQALMERV NSMEQDAKAF HSHLEDQRQK ALTDPLTGLP NRAALSERLE QEVARRHRDG
GDLLLAVLDI DHFKRINDDF GHLAGDKVLK IIAGELRKRL RQADFIARFG GEEFVVLLPA
TSLEAGRQLL ERLRAAIAAC PFHFKGEPLS ITCSAGITAF EGNEAGEVVF ERADQALYRA
KRAGRDRLEV A