DGP13_ARATH
ID DGP13_ARATH Reviewed; 486 AA.
AC Q9FM41; F4KHF0;
DT 24-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 119.
DE RecName: Full=Putative protease Do-like 13;
DE EC=3.4.21.-;
GN Name=DEGP13; OrderedLocusNames=At5g40560; ORFNames=MNF13.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11299370; DOI=10.1104/pp.125.4.1912;
RA Adam Z., Adamska I., Nakabayashi K., Ostersetzer O., Haussuhl K.,
RA Manuell A., Zheng B., Vallon O., Rodermel S.R., Shinozaki K., Clarke A.K.;
RT "Chloroplast and mitochondrial proteases in Arabidopsis. A proposed
RT nomenclature.";
RL Plant Physiol. 125:1912-1918(2001).
CC -!- FUNCTION: Putative serine protease.
CC -!- SIMILARITY: Belongs to the peptidase S1C family. {ECO:0000305}.
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DR EMBL; AB009052; BAB08526.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94564.2; -; Genomic_DNA.
DR RefSeq; NP_001318714.1; NM_001344343.1.
DR AlphaFoldDB; Q9FM41; -.
DR SMR; Q9FM41; -.
DR STRING; 3702.AT5G40560.1; -.
DR MEROPS; S01.A06; -.
DR PaxDb; Q9FM41; -.
DR PRIDE; Q9FM41; -.
DR EnsemblPlants; AT5G40560.1; AT5G40560.1; AT5G40560.
DR GeneID; 834054; -.
DR Gramene; AT5G40560.1; AT5G40560.1; AT5G40560.
DR KEGG; ath:AT5G40560; -.
DR Araport; AT5G40560; -.
DR eggNOG; KOG1320; Eukaryota.
DR HOGENOM; CLU_020120_10_2_1; -.
DR InParanoid; Q9FM41; -.
DR OMA; IYNINQH; -.
DR OrthoDB; 594175at2759; -.
DR PhylomeDB; Q9FM41; -.
DR PRO; PR:Q9FM41; -.
DR Proteomes; UP000006548; Chromosome 5.
DR Genevisible; Q9FM41; AT.
DR GO; GO:0004252; F:serine-type endopeptidase activity; IBA:GO_Central.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR Gene3D; 2.30.42.10; -; 1.
DR InterPro; IPR041517; DEGP_PDZ.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR InterPro; IPR009003; Peptidase_S1_PA.
DR InterPro; IPR001940; Peptidase_S1C.
DR Pfam; PF13180; PDZ_2; 1.
DR Pfam; PF17815; PDZ_3; 1.
DR PRINTS; PR00834; PROTEASES2C.
DR SUPFAM; SSF50156; SSF50156; 1.
DR SUPFAM; SSF50494; SSF50494; 1.
PE 3: Inferred from homology;
KW Hydrolase; Protease; Reference proteome; Serine protease.
FT CHAIN 1..486
FT /note="Putative protease Do-like 13"
FT /id="PRO_0000093864"
FT DOMAIN 241..334
FT /note="PDZ"
FT REGION 44..229
FT /note="Serine protease"
FT ACT_SITE 83
FT /note="Charge relay system"
FT /evidence="ECO:0000255"
FT ACT_SITE 114
FT /note="Charge relay system"
FT /evidence="ECO:0000255"
FT ACT_SITE 192
FT /note="Charge relay system"
FT /evidence="ECO:0000255"
SQ SEQUENCE 486 AA; 54150 MW; 8740A6560B1326F4 CRC64;
MIQLNEPLTH VRTKPILISL EFESPGRKTI DSVATESVLN SVVKINTFSS KPNICYPWQN
KPQKKSKGSG FVIPGKMIIT NAHVVANHIL VLVIKRGSPK KYKAEVKAIG RECDLAILVI
ESKEFWEDMN PLELGDMPFL QESVNVIGYP TGGENISVTK GVVSRIESMD YAHGAINLPA
IQTDAAMNPG NSGGPVCIGN KVVGVAFQTL GHSNNIGCLI PAPVVKHFIT GVEKTGQYVG
FCSLNLSYQH MDAQTRSHFK MNSEMTGILI YNINQHSDAL NILKKYDVIL SIDGVAIEND
GTVIIPNRER TRLDDLVSLK QLGETILLKI LREGKMHEFN ITLRPVQRLV PAGQIDNNPS
YYIFAGFVFV PLRKQHFKGS NGEQIVVISE VLADVINVEY YMYKHLKVNS VNKVKVENLK
HLCELIEKCC TKDLRLELGD GRVIILDYQF AKSSTSLILE RHRVPWAMSK DLMTDQSTTC
SSTRLY