DH16D_ORYSJ
ID DH16D_ORYSJ Reviewed; 151 AA.
AC Q2R4Z8; B7F1V5; P22913; Q53LA0;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Dehydrin Rab16D;
GN Name=RAB16D; OrderedLocusNames=Os11g0453900, LOC_Os11g26750;
GN ORFNames=OsJ_032468;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SIMILARITY: Belongs to the plant dehydrin family. {ECO:0000305}.
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DR EMBL; AC145325; AAX96132.1; -; Genomic_DNA.
DR EMBL; DP000010; ABA93490.1; -; Genomic_DNA.
DR EMBL; AP008217; BAF28204.1; -; Genomic_DNA.
DR EMBL; AP014967; BAT13913.1; -; Genomic_DNA.
DR EMBL; CM000148; EAZ18259.1; -; Genomic_DNA.
DR EMBL; AK109096; BAG98602.1; -; mRNA.
DR RefSeq; XP_015617611.1; XM_015762125.1.
DR AlphaFoldDB; Q2R4Z8; -.
DR STRING; 4530.OS11T0453900-01; -.
DR PaxDb; Q2R4Z8; -.
DR PRIDE; Q2R4Z8; -.
DR EnsemblPlants; Os11t0453900-01; Os11t0453900-01; Os11g0453900.
DR GeneID; 4350451; -.
DR Gramene; Os11t0453900-01; Os11t0453900-01; Os11g0453900.
DR KEGG; osa:4350451; -.
DR eggNOG; ENOG502S4VW; Eukaryota.
DR HOGENOM; CLU_060028_2_0_1; -.
DR InParanoid; Q2R4Z8; -.
DR OMA; GAGHIQK; -.
DR OrthoDB; 1648739at2759; -.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000007752; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR Genevisible; Q2R4Z8; OS.
DR GO; GO:0009631; P:cold acclimation; IBA:GO_Central.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR GO; GO:0009414; P:response to water deprivation; IBA:GO_Central.
DR InterPro; IPR000167; Dehydrin.
DR InterPro; IPR030513; Dehydrin_CS.
DR PANTHER; PTHR33346; PTHR33346; 1.
DR Pfam; PF00257; Dehydrin; 1.
DR PROSITE; PS00315; DEHYDRIN_1; 1.
DR PROSITE; PS00823; DEHYDRIN_2; 2.
PE 2: Evidence at transcript level;
KW Reference proteome; Stress response.
FT CHAIN 1..151
FT /note="Dehydrin Rab16D"
FT /id="PRO_0000100054"
FT REGION 1..138
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 66..85
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 87..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 151 AA; 15552 MW; 9D80F4E6AF9AB427 CRC64;
MEYQGQHGGH ASSRADEHGN PAVTTGNAPT GMGAGHIQEP AREDKKTDGV LRRSGSSSSS
SSSEDDGMGG RRKKGIKEKI KEKLPGGNKG NNQQQQQEHT TTTTGGAYGP QGHDTKIATG
AHGGTAATTA DAGGEKKGIV DKIKEKLPGQ H
