DHE2_BACFR
ID DHE2_BACFR Reviewed; 445 AA.
AC P94316; Q64Q53;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 2.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=NAD-specific glutamate dehydrogenase;
DE Short=NAD-GDH;
DE EC=1.4.1.2;
DE AltName: Full=NADH-dependent glutamate dehydrogenase;
GN Name=gdhB; OrderedLocusNames=BF3635;
OS Bacteroides fragilis (strain YCH46).
OC Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=295405;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=BF1;
RX PubMed=9639936; DOI=10.1099/00221287-144-6-1659;
RA Abrahams G.L., Abratt V.R.;
RT "The NADH-dependent glutamate dehydrogenase enzyme of Bacteroides fragilis
RT Bf1 is induced by peptides in the growth medium.";
RL Microbiology 144:1659-1667(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YCH46;
RX PubMed=15466707; DOI=10.1073/pnas.0404172101;
RA Kuwahara T., Yamashita A., Hirakawa H., Nakayama H., Toh H., Okada N.,
RA Kuhara S., Hattori M., Hayashi T., Ohnishi Y.;
RT "Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions
RT regulating cell surface adaptation.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14919-14924(2004).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H2O + L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + NADH +
CC NH4(+); Xref=Rhea:RHEA:15133, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:28938, ChEBI:CHEBI:29985,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=1.4.1.2;
CC -!- SUBUNIT: Homohexamer. {ECO:0000250}.
CC -!- INDUCTION: By high peptide concentrations.
CC -!- SIMILARITY: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
CC {ECO:0000305}.
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DR EMBL; U78108; AAC26399.1; -; Genomic_DNA.
DR EMBL; AP006841; BAD50378.1; -; Genomic_DNA.
DR RefSeq; WP_011203378.1; NC_006347.1.
DR RefSeq; YP_100912.1; NC_006347.1.
DR AlphaFoldDB; P94316; -.
DR SMR; P94316; -.
DR STRING; 295405.BF3635; -.
DR PRIDE; P94316; -.
DR EnsemblBacteria; BAD50378; BAD50378; BF3635.
DR KEGG; bfr:BF3635; -.
DR PATRIC; fig|295405.11.peg.3488; -.
DR HOGENOM; CLU_025763_2_1_10; -.
DR OMA; PCFAAFP; -.
DR Proteomes; UP000002197; Chromosome.
DR GO; GO:0004352; F:glutamate dehydrogenase (NAD+) activity; IEA:UniProtKB-EC.
DR GO; GO:0006520; P:cellular amino acid metabolic process; IEA:InterPro.
DR CDD; cd05313; NAD_bind_2_Glu_DH; 1.
DR InterPro; IPR046346; Aminiacid_DH-like_N_sf.
DR InterPro; IPR006095; Glu/Leu/Phe/Val_DH.
DR InterPro; IPR033524; Glu/Leu/Phe/Val_DH_AS.
DR InterPro; IPR006096; Glu/Leu/Phe/Val_DH_C.
DR InterPro; IPR006097; Glu/Leu/Phe/Val_DH_dimer_dom.
DR InterPro; IPR014362; Glu_DH.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR033922; NAD_bind_Glu_DH.
DR Pfam; PF00208; ELFV_dehydrog; 1.
DR Pfam; PF02812; ELFV_dehydrog_N; 1.
DR PIRSF; PIRSF000185; Glu_DH; 1.
DR PRINTS; PR00082; GLFDHDRGNASE.
DR SMART; SM00839; ELFV_dehydrog; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
DR SUPFAM; SSF53223; SSF53223; 1.
DR PROSITE; PS00074; GLFV_DEHYDROGENASE; 1.
PE 2: Evidence at transcript level;
KW NAD; Oxidoreductase.
FT CHAIN 1..445
FT /note="NAD-specific glutamate dehydrogenase"
FT /id="PRO_0000182765"
FT ACT_SITE 124
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10011"
FT BINDING 235..241
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255"
FT CONFLICT 44
FT /note="S -> A (in Ref. 1; AAC26399)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 445 AA; 48390 MW; E7462E4E6963217B CRC64;
MNIEKIMSSL EAKHPGESEY LQAVKEVLLS IEDIYNQHPE FEKSKIIERL VEPDRIFTFR
VTWVDDKGEV QTNLGYRVQF NNAIGPYKGG IRFHASVNLS ILKFLGFEQT FKNALTTLPM
GGGKGGSDFS PRGKSDAEIM RFCQAFMLEL WRHLGPDMDV PAGDIGVGGR EVGYMFGMYK
KLTREFTGTF TGKGLEFGGS LIRPEATGFG GLYFVNQMLQ TKGIDIKGKT VAISGFGNVA
WGAATKATEL GAKVVTISGP DGYIYDPNGI SGEKIDYMLE LRASGNDIVA PYADEFPGST
FVAGKRPWEV KADIALPCAT QNELNGEDAK NLIDNNVLCV GEISNMGCTP EAIDLFIEHK
TMYAPGKAVN AGGVATSGLE MSQNAMHLSW SAAEVDEKLH SIMHGIHAQC VKYGTEPDGY
INYVKGANIA GFMKVAHAMM GQGII