DHE2_MYCTU
ID DHE2_MYCTU Reviewed; 1624 AA.
AC O53203; L0T9R1;
DT 03-OCT-2012, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=NAD-specific glutamate dehydrogenase;
DE Short=NAD-GDH;
DE EC=1.4.1.2;
DE AltName: Full=NAD(+)-dependent glutamate dehydrogenase;
GN Name=gdh; OrderedLocusNames=Rv2476c;
OS Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium; Mycobacterium tuberculosis complex.
OX NCBI_TaxID=83332;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=9634230; DOI=10.1038/31159;
RA Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E.,
RA Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K.,
RA Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K.,
RA Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K.,
RA Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J.,
RA Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S.,
RA Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S.,
RA Barrell B.G.;
RT "Deciphering the biology of Mycobacterium tuberculosis from the complete
RT genome sequence.";
RL Nature 393:537-544(1998).
RN [2]
RP INTERACTION WITH GARA.
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=19019160; DOI=10.1111/j.1365-2958.2008.06489.x;
RA O'Hare H.M., Duran R., Cervenansky C., Bellinzoni M., Wehenkel A.M.,
RA Pritsch O., Obal G., Baumgartner J., Vialaret J., Johnsson K., Alzari P.M.;
RT "Regulation of glutamate metabolism by protein kinases in mycobacteria.";
RL Mol. Microbiol. 70:1408-1423(2008).
RN [3]
RP ACTIVITY REGULATION, AND INTERACTION WITH GARA.
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=19318624; DOI=10.1126/scisignal.2000212;
RA Nott T.J., Kelly G., Stach L., Li J., Westcott S., Patel D., Hunt D.M.,
RA Howell S., Buxton R.S., O'Hare H.M., Smerdon S.J.;
RT "An intramolecular switch regulates phosphoindependent FHA domain
RT interactions in Mycobacterium tuberculosis.";
RL Sci. Signal. 2:RA12-RA12(2009).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=21969609; DOI=10.1074/mcp.m111.011627;
RA Kelkar D.S., Kumar D., Kumar P., Balakrishnan L., Muthusamy B., Yadav A.K.,
RA Shrivastava P., Marimuthu A., Anand S., Sundaram H., Kingsbury R.,
RA Harsha H.C., Nair B., Prasad T.S., Chauhan D.S., Katoch K., Katoch V.M.,
RA Kumar P., Chaerkady R., Ramachandran S., Dash D., Pandey A.;
RT "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution
RT mass spectrometry.";
RL Mol. Cell. Proteomics 10:M111.011627-M111.011627(2011).
CC -!- FUNCTION: Catalyzes the reversible conversion of L-glutamate to 2-
CC oxoglutarate. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H2O + L-glutamate + NAD(+) = 2-oxoglutarate + H(+) + NADH +
CC NH4(+); Xref=Rhea:RHEA:15133, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:28938, ChEBI:CHEBI:29985,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=1.4.1.2;
CC -!- ACTIVITY REGULATION: Activity is inhibited by unphosphorylated GarA.
CC {ECO:0000269|PubMed:19318624}.
CC -!- SUBUNIT: Interacts with (unphosphorylated) GarA.
CC {ECO:0000269|PubMed:19019160, ECO:0000269|PubMed:19318624}.
CC -!- INTERACTION:
CC O53203; P9WJA9: garA; NbExp=5; IntAct=EBI-6405569, EBI-6405522;
CC -!- SIMILARITY: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
CC {ECO:0000305}.
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DR EMBL; AL123456; CCP45270.1; -; Genomic_DNA.
DR PIR; C70867; C70867.
DR RefSeq; NP_216992.1; NC_000962.3.
DR RefSeq; WP_003916039.1; NZ_NVQJ01000024.1.
DR AlphaFoldDB; O53203; -.
DR SMR; O53203; -.
DR IntAct; O53203; 1.
DR STRING; 83332.Rv2476c; -.
DR PaxDb; O53203; -.
DR PRIDE; O53203; -.
DR GeneID; 887437; -.
DR KEGG; mtu:Rv2476c; -.
DR TubercuList; Rv2476c; -.
DR eggNOG; COG2902; Bacteria.
DR InParanoid; O53203; -.
DR OMA; RATRWFL; -.
DR PhylomeDB; O53203; -.
DR Proteomes; UP000001584; Chromosome.
DR GO; GO:0005829; C:cytosol; HDA:MTBBASE.
DR GO; GO:0009274; C:peptidoglycan-based cell wall; HDA:MTBBASE.
DR GO; GO:0005886; C:plasma membrane; HDA:MTBBASE.
DR GO; GO:0004352; F:glutamate dehydrogenase (NAD+) activity; IBA:GO_Central.
DR GO; GO:0006538; P:glutamate catabolic process; IBA:GO_Central.
DR GO; GO:0019551; P:glutamate catabolic process to 2-oxoglutarate; IEA:InterPro.
DR InterPro; IPR046346; Aminiacid_DH-like_N_sf.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR028971; NAD-GDH.
DR InterPro; IPR007780; NAD_Glu_DH_bac.
DR PANTHER; PTHR43403; PTHR43403; 1.
DR Pfam; PF05088; Bac_GDH; 1.
DR PIRSF; PIRSF036761; GDH_Mll4104; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
DR SUPFAM; SSF53223; SSF53223; 1.
PE 1: Evidence at protein level;
KW NAD; Oxidoreductase; Reference proteome.
FT CHAIN 1..1624
FT /note="NAD-specific glutamate dehydrogenase"
FT /id="PRO_0000419536"
FT ACT_SITE 845
FT /evidence="ECO:0000250"
SQ SEQUENCE 1624 AA; 176900 MW; B8ED8C54C24CCFAA CRC64;
MTIDPGAKQD VEAWTTFTAS ADIPDWISKA YIDSYRGPRD DSSEATKAAE ASWLPASLLT
PAMLGAHYRL GRHRAAGESC VAVYRADDPA GFGPALQVVA EHGGMLMDSV TVLLHRLGIA
YAAILTPVFD VHRSPTGELL RIEPKAEGTS PHLGEAWMHV ALSPAVDHKG LAEVERLLPK
VLADVQRVAT DATALIATLS ELAGEVESNA GGRFSAPDRQ DVGELLRWLG DGNFLLLGYQ
RCRVADGMVY GEGSSGMGVL RGRTGSRPRL TDDDKLLVLA QARVGSYLRY GAYPYAIAVR
EYVDGSVVEH RFVGLFSVAA MNADVLEIPT ISRRVREALA MAESDPSHPG QLLLDVIQTV
PRPELFTLSA QRLLTMARAV VDLGSQRQAL LFLRADRLQY FVSCLVYMPR DRYTTAVRMQ
FEDILVREFG GTRLEFTARV SESPWALMHF MVRLPEVGVA GEGAAAPPVD VSEANRIRIQ
GLLTEAARTW ADRLIGAAAA AGSVGQADAM HYAAAFSEAY KQAVTPADAI GDIAVITELT
DDSVKLVFSE RDEQGVAQLT WFLGGRTASL SQLLPMLQSM GVVVLEERPF SVTRPDGLPV
WIYQFKISPH PTIPLAPTVA ERAATAHRFA EAVTAIWHGR VEIDRFNELV MRAGLTWQQV
VLLRAYAKYL RQAGFPYSQS YIESVLNEHP ATVRSLVDLF EALFVPVPSG SASNRDAQAA
AAAVAADIDA LVSLDTDRIL RAFASLVQAT LRTNYFVTRQ GSARCRDVLA LKLNAQLIDE
LPLPRPRYEI FVYSPRVEGV HLRFGPVARG GLRWSDRRDD FRTEILGLVK AQAVKNAVIV
PVGAKGGFVV KRPPLPTGDP AADRDATRAE GVACYQLFIS GLLDVTDNVD HATASVNPPP
EVVRRDGDDA YLVVAADKGT ATFSDIANDV AKSYGFWLGD AFASGGSVGY DHKAMGITAR
GAWEAVKRHF REIGIDTQTQ DFTVVGIGDM SGDVFGNGML LSKHIRLIAA FDHRHIFLDP
NPDAAVSWAE RRRMFELPRS SWSDYDRSLI SEGGGVYSRE QKAIPLSAQV RAVLGIDGSV
DGGAAEMAPP NLIRAILRAP VDLLFNGGIG TYIKAESESD ADVGDRANDP VRVNANQVRA
KVIGEGGNLG VTALGRVEFD LSGGRINTDA LDNSAGVDCS DHEVNIKILI DSLVSAGTVK
ADERTQLLES MTDEVAQLVL ADNEDQNDLM GTSRANAASL LPVHAMQIKY LVAERGVNRE
LEALPSEKEI ARRSEAGIGL TSPELATLMA HVKLGLKEEV LATELPDQDV FASRLPRYFP
TALRERFTPE IRSHQLRREI VTTMLINDLV DTAGITYAFR IAEDVGVTPI DAVRTYVATD
AIFGVGHIWR RIRAANLPIA LSDRLTLDTR RLIDRAGRWL LNYRPQPLAV GAEINRFAAM
VKALTPRMSE WLRGDDKAIV EKTAAEFASQ GVPEDLAYRV STGLYRYSLL DIIDIADIAD
IDAAEVADTY FALMDRLGTD GLLTAVSQLP RHDRWHSLAR LAIRDDIYGA LRSLCFDVLA
VGEPGESSEQ KIAEWEHLSA SRVARARRTL DDIRASGQKD LATLSVAARQ IRRMTRTSGR
GISG