DHE4_PSYT1
ID DHE4_PSYT1 Reviewed; 448 AA.
AC Q9S1F9;
DT 13-AUG-2002, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 4.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=NADP-specific glutamate dehydrogenase;
DE Short=NADP-GDH;
DE EC=1.4.1.4 {ECO:0000269|PubMed:10601858};
GN Name=gdhA; Synonyms=gdh {ECO:0000303|PubMed:10601858};
OS Psychrobacter sp. (strain TAD1).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Moraxellales; Moraxellaceae;
OC Psychrobacter.
OX NCBI_TaxID=81861;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 2-448, FUNCTION AS A
RP GLUTAMATE DEHYDROGENASE, CATALYTIC ACTIVITY, SUBUNIT, AND
RP BIOPHYSICOCHEMICAL PROPERTIES.
RC STRAIN=TAD1;
RX PubMed=10601858; DOI=10.1046/j.1432-1327.2000.00972.x;
RA Di Fraia R., Wilquet V., Ciardiello M.A., Carratore V., Antignani A.,
RA Camardella L., Glansdorff N., Di Prisco G.;
RT "NADP+-dependent glutamate dehydrogenase in the Antarctic psychrotolerant
RT bacterium Psychrobacter sp. TAD1. Characterization, protein and DNA
RT sequence, and relationship to other glutamate dehydrogenases.";
RL Eur. J. Biochem. 267:121-131(2000).
CC -!- FUNCTION: Catalyzes the reversible oxidative deamination of glutamate
CC to alpha-ketoglutarate and ammonia. {ECO:0000269|PubMed:10601858}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=H2O + L-glutamate + NADP(+) = 2-oxoglutarate + H(+) + NADPH +
CC NH4(+); Xref=Rhea:RHEA:11612, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16810, ChEBI:CHEBI:28938, ChEBI:CHEBI:29985,
CC ChEBI:CHEBI:57783, ChEBI:CHEBI:58349; EC=1.4.1.4;
CC Evidence={ECO:0000269|PubMed:10601858};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=0.043 mM for NADP (at 20 degrees Celsius and at pH 8)
CC {ECO:0000269|PubMed:10601858};
CC KM=4 mM for ammonium (at 20 degrees Celsius and at pH 8)
CC {ECO:0000269|PubMed:10601858};
CC KM=67.4 mM for L-glutamate (at 20 degrees Celsius and at pH 8)
CC {ECO:0000269|PubMed:10601858};
CC pH dependence:
CC Optimum pH is 8. {ECO:0000269|PubMed:10601858};
CC Temperature dependence:
CC Optimum temperature is 25 degrees Celsius.
CC {ECO:0000269|PubMed:10601858};
CC -!- SUBUNIT: Homohexamer. {ECO:0000269|PubMed:10601858}.
CC -!- SIMILARITY: Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
CC {ECO:0000305}.
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DR EMBL; AJ010746; CAB54142.1; -; Genomic_DNA.
DR AlphaFoldDB; Q9S1F9; -.
DR SMR; Q9S1F9; -.
DR PRIDE; Q9S1F9; -.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0004354; F:glutamate dehydrogenase (NADP+) activity; IMP:UniProtKB.
DR GO; GO:0006537; P:glutamate biosynthetic process; IMP:UniProtKB.
DR InterPro; IPR046346; Aminiacid_DH-like_N_sf.
DR InterPro; IPR006095; Glu/Leu/Phe/Val_DH.
DR InterPro; IPR033524; Glu/Leu/Phe/Val_DH_AS.
DR InterPro; IPR006096; Glu/Leu/Phe/Val_DH_C.
DR InterPro; IPR006097; Glu/Leu/Phe/Val_DH_dimer_dom.
DR InterPro; IPR014362; Glu_DH.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF00208; ELFV_dehydrog; 1.
DR Pfam; PF02812; ELFV_dehydrog_N; 1.
DR PIRSF; PIRSF000185; Glu_DH; 1.
DR PRINTS; PR00082; GLFDHDRGNASE.
DR SMART; SM00839; ELFV_dehydrog; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
DR SUPFAM; SSF53223; SSF53223; 1.
DR PROSITE; PS00074; GLFV_DEHYDROGENASE; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; NADP; Oxidoreductase.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:10601858"
FT CHAIN 2..448
FT /note="NADP-specific glutamate dehydrogenase"
FT /id="PRO_0000182774"
FT ACT_SITE 124
FT /note="Proton donor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10011"
FT BINDING 88
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 109
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 112
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 163
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT BINDING 207
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250"
FT BINDING 238
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250"
FT BINDING 375
FT /ligand="substrate"
FT /evidence="ECO:0000250"
FT SITE 164
FT /note="Important for catalysis"
FT /evidence="ECO:0000250"
SQ SEQUENCE 448 AA; 49448 MW; EE24FEA463DCB660 CRC64;
MSISKAIEKV EARYAHQPEF IQAVKEVAIT IKPLYDAHPE YDKLKVFERL VEPDRVFGFR
VNWEDDNGEI QINRGWRVQF SNALGPYKGG LRFHPTVNQS VLKFLGFEQI FKNALTGLPI
GGGKGGSDFD PKGKTDSEIR RFCYAFMREL HHYVNKDMDV PAGDIGVGGR EVSYMFAMYK
NLTRESTGVI TGKGVGFGGS LMRTEATGYG AVYFLQNMLA AQNESIEGKK VLVSGAGNVS
LHAAEKATLI GAIVLTVSDS KGTIYDAKGL NQEKIDWLKV QKDQHKPLAD YVEVFGGEWM
ADQKPWSIKA DIAIPSATQN EINEEDAKLL VDNGVKYIVE GANMPLTAEA IDYIRLHRVH
YAPGKAANAG GVAVSALEMS QNSVRQYQTF EQVDERLQGI MKDIHDSSAQ ASEMYGQTDE
GYIDYMSGAN MVGFKRVADA LVAFGILN