DHLEA_ARATH
ID DHLEA_ARATH Reviewed; 185 AA.
AC Q96261; Q42254; Q8L9Q5;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Probable dehydrin LEA;
GN Name=LEA; OrderedLocusNames=At2g21490; ORFNames=F3K23.25;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia; TISSUE=Dry seed;
RA Raynal M.;
RL Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 66-170.
RC STRAIN=cv. Columbia; TISSUE=Dry seed;
RX PubMed=8580968; DOI=10.1046/j.1365-313x.1996.09010101.x;
RA Cooke R., Raynal M., Laudie M., Grellet F., Delseny M., Morris P.-C.,
RA Guerrier D., Giraudat J., Quigley F., Clabault G., Li Y.-F., Mache R.,
RA Krivitzky M., Gy I.J.-J., Kreis M., Lecharny A., Parmentier Y., Marbach J.,
RA Fleck J., Clement B., Philipps G., Herve C., Bardet C., Tremousaygue D.,
RA Lescure B., Lacomme C., Roby D., Jourjon M.-F., Chabrier P.,
RA Charpenteau J.-L., Desprez T., Amselem J., Chiapello H., Hoefte H.;
RT "Further progress towards a catalogue of all Arabidopsis genes: analysis of
RT a set of 5000 non-redundant ESTs.";
RL Plant J. 9:101-124(1996).
CC -!- SIMILARITY: Belongs to the plant dehydrin family. {ECO:0000305}.
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DR EMBL; X91920; CAA63013.1; -; mRNA.
DR EMBL; AC006841; AAD23693.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07185.1; -; Genomic_DNA.
DR EMBL; AY052342; AAK96534.1; -; mRNA.
DR EMBL; AY061911; AAL31238.1; -; mRNA.
DR EMBL; BT000900; AAN41300.1; -; mRNA.
DR EMBL; AY088292; AAM65831.1; -; mRNA.
DR EMBL; Z32586; CAA83556.1; -; mRNA.
DR PIR; H84601; H84601.
DR RefSeq; NP_179744.1; NM_127721.4.
DR AlphaFoldDB; Q96261; -.
DR STRING; 3702.AT2G21490.1; -.
DR PaxDb; Q96261; -.
DR PRIDE; Q96261; -.
DR ProteomicsDB; 224040; -.
DR EnsemblPlants; AT2G21490.1; AT2G21490.1; AT2G21490.
DR GeneID; 816688; -.
DR Gramene; AT2G21490.1; AT2G21490.1; AT2G21490.
DR KEGG; ath:AT2G21490; -.
DR Araport; AT2G21490; -.
DR TAIR; locus:2050095; AT2G21490.
DR eggNOG; ENOG502S48F; Eukaryota.
DR HOGENOM; CLU_060028_1_0_1; -.
DR InParanoid; Q96261; -.
DR OMA; QHHGSLE; -.
DR OrthoDB; 1596660at2759; -.
DR PRO; PR:Q96261; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q96261; baseline and differential.
DR Genevisible; Q96261; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProt.
DR GO; GO:0009631; P:cold acclimation; IBA:GO_Central.
DR GO; GO:0009737; P:response to abscisic acid; IBA:GO_Central.
DR GO; GO:0009414; P:response to water deprivation; IBA:GO_Central.
DR InterPro; IPR000167; Dehydrin.
DR InterPro; IPR030513; Dehydrin_CS.
DR PANTHER; PTHR33346; PTHR33346; 1.
DR Pfam; PF00257; Dehydrin; 1.
DR PROSITE; PS00315; DEHYDRIN_1; 1.
DR PROSITE; PS00823; DEHYDRIN_2; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..185
FT /note="Probable dehydrin LEA"
FT /id="PRO_0000100035"
FT REGION 1..185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..58
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..98
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 119..143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..160
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 163..177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 71
FT /note="A -> T (in Ref. 5; AAM65831)"
FT /evidence="ECO:0000305"
FT CONFLICT 138
FT /note="G -> S (in Ref. 5; AAM65831)"
FT /evidence="ECO:0000305"
FT CONFLICT 149
FT /note="A -> T (in Ref. 5; AAM65831)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 185 AA; 19298 MW; 21ED8B08DA36D5FD CRC64;
MADLRDEKGN PIHLTDTQGN PIVDLTDEHG NPMYLTGVVS STPQHKESTT SDIAEHPTST
VGETHPAAAP AGAGAATAAT ATGVSAGTGA TTTGQQHHGS LEEHLRRSGS SSSSSSEDDG
QGGRRKKSIK EKIKEKFGSG KHKDEQTPAT ATTTGPATTD QPHEKKGILE KIKDKLPGHH
NHNHP
