DHTK1_DICDI
ID DHTK1_DICDI Reviewed; 900 AA.
AC Q54VG0;
DT 24-NOV-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAY-2005, sequence version 1.
DT 25-MAY-2022, entry version 98.
DE RecName: Full=Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial;
DE EC=1.2.4.2;
DE AltName: Full=Oxoglutarate dehydrogenase A;
DE Flags: Precursor;
GN Name=odhA; ORFNames=DDB_G0280353;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- FUNCTION: The 2-oxoglutarate dehydrogenase complex catalyzes the
CC overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It
CC contains multiple copies of three enzymatic components: 2-oxoglutarate
CC dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and
CC lipoamide dehydrogenase (E3) (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-lipoyl-L-lysyl-[dihydrolipoyllysine-residue
CC succinyltransferase] + 2-oxoglutarate + H(+) = (R)-N(6)-(S(8)-
CC succinyldihydrolipoyl)-L-lysyl-[dihydrolipoyllysine-residue
CC succinyltransferase] + CO2; Xref=Rhea:RHEA:12188, Rhea:RHEA-
CC COMP:10483, Rhea:RHEA-COMP:10484, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16526, ChEBI:CHEBI:16810, ChEBI:CHEBI:83099,
CC ChEBI:CHEBI:83120; EC=1.2.4.2;
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the alpha-ketoglutarate dehydrogenase family.
CC {ECO:0000305}.
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DR EMBL; AAFI02000035; EAL67403.1; -; Genomic_DNA.
DR RefSeq; XP_641395.1; XM_636303.1.
DR AlphaFoldDB; Q54VG0; -.
DR SMR; Q54VG0; -.
DR STRING; 44689.DDB0230197; -.
DR PaxDb; Q54VG0; -.
DR EnsemblProtists; EAL67403; EAL67403; DDB_G0280353.
DR GeneID; 8622529; -.
DR KEGG; ddi:DDB_G0280353; -.
DR dictyBase; DDB_G0280353; odhA.
DR eggNOG; KOG0451; Eukaryota.
DR HOGENOM; CLU_004709_1_0_1; -.
DR InParanoid; Q54VG0; -.
DR OMA; GMAIDNP; -.
DR PhylomeDB; Q54VG0; -.
DR Reactome; R-DDI-389661; Glyoxylate metabolism and glycine degradation.
DR PRO; PR:Q54VG0; -.
DR Proteomes; UP000002195; Chromosome 3.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IC:dictyBase.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006096; P:glycolytic process; IEA:UniProtKB-KW.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR Gene3D; 3.40.50.11610; -; 1.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR PANTHER; PTHR23152; PTHR23152; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; SSF52518; 2.
DR TIGRFAMs; TIGR00239; 2oxo_dh_E1; 1.
PE 3: Inferred from homology;
KW Glycolysis; Mitochondrion; Oxidoreductase; Reference proteome;
KW Thiamine pyrophosphate; Transit peptide.
FT TRANSIT 1..?
FT /note="Mitochondrion"
FT /evidence="ECO:0000255"
FT CHAIN ?..900
FT /note="Probable 2-oxoglutarate dehydrogenase E1 component
FT DHKTD1 homolog, mitochondrial"
FT /id="PRO_0000388782"
SQ SEQUENCE 900 AA; 101831 MW; F2F2A86C9191EF98 CRC64;
MIGLRSISKN KQTINSISKS FYCTSSPSSS SVKLSVTRLI DGYRAHGHLA ANIDPLARME
RIRSQLLDLD RYNLVKGQSI PSTIDLINQD LTNLDQVVSF LENAYCNDVT AQFDHIESIE
EKAWLYEKFE QLQHQNPSKS EKINILKNLI KSEIFDQFMQ KKFPTFKRYG LEGNESMMVS
CDSIFRESAK NQLKNVVIGM PHRGRLNLLV QMCNYPAKDF FWKVKGNSEF SEGILGVGDV
TSHIAVSTDL QFNNNKESVH VSLIHNPSHL EAVDPVAAGK TRAKQFYEKN EGGSESLCLM
LHGDAAVAGQ GVVTETLQLS QLSGFNIGGC VHVIVNNQIG FTTVPTNGRS NRYSSDIGKF
IGAPIIVVNS QSPEQVEKVS RLAVEYRQKF KKDIIIDLIG WRKFGHNEVD EPSFTQPTMY
QNIRKRQSIP QKYATQIISQ GIFSEQELLE FTQKEQAILE EQFQLSTPEN FKYSPMDHLQ
GKWSGLIQSK HIADDSKLDT GYSVEELSEI ANDSVKVPSD FQVHQRLLRS FSNARLEKLK
QNQADWATAE SMAVGSLMKQ GYNVRISGQD VGRGTFSQRH FNLTEQNSDR IYQPLNNMGA
KGELDVVNSN LSEFAVLCYE YGYSLESPDT LPIWEAQFGD FINGAQIAID QFVTSGESKW
LRQSGIVILL PHGFDGAGPE HSSCRIERFL QLSDTEAVNV KDDTLINQET NFYFINPSTP
ANYFHALRRQ MIRNYRKPLI VAGPKVLLRH PNCFSTLNEM APGTHFQTVL SDPDTINNAS
TIKRVIFCSG KVFYDLQEER KAKNFNDVAI IRLEQIAPFP YQRIQEEINR YSNATKFAWV
QEEQQNGGCW SFVEPRFKQR YPQTSQIKYI GRPPLAASAI GISSIHKKEV SQLLIDAFNF