DI195_ARATH
ID DI195_ARATH Reviewed; 214 AA.
AC O04259; A8MR81; Q7G0Q3;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1999, sequence version 2.
DT 25-MAY-2022, entry version 139.
DE RecName: Full=Protein DEHYDRATION-INDUCED 19 homolog 5;
DE Short=AtDi19-5;
GN Name=DI19-5; OrderedLocusNames=At4g02200; ORFNames=T10M13.20, T2H3.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=11910074; DOI=10.1126/science.1071006;
RA Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M., Hayashizaki Y.,
RA Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T., Shibata K.,
RA Shinagawa A., Shinozaki K.;
RT "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL Science 296:141-145(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP SUBCELLULAR LOCATION, TISSUE SPECIFICITY, PHOSPHORYLATION, GENE FAMILY, AND
RP NOMENCLATURE.
RX PubMed=16786289; DOI=10.1007/s11103-005-5798-7;
RA Rodriguez Milla M.A., Townsend J., Chang I.-F., Cushman J.C.;
RT "The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-
RT finger protein implicated in ABA-independent dehydration, high-salinity
RT stress and light signaling pathways.";
RL Plant Mol. Biol. 61:13-30(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16786289}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=O04259-1; Sequence=Displayed;
CC Name=2;
CC IsoId=O04259-2; Sequence=VSP_034049;
CC -!- TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves, stems,
CC flowers and siliques. {ECO:0000269|PubMed:16786289}.
CC -!- INDUCTION: Not induced by abscisic acid.
CC -!- PTM: Phosphorylated in vitro by CPK3 or CPK11.
CC {ECO:0000269|PubMed:16786289}.
CC -!- MISCELLANEOUS: [Isoform 2]: May be due to an intron retention.
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the Di19 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAC28179.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF001308; AAC78710.1; -; Genomic_DNA.
DR EMBL; AF075597; AAC28179.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161494; CAB80713.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE82137.1; -; Genomic_DNA.
DR EMBL; CP002687; AEE82138.1; -; Genomic_DNA.
DR EMBL; AK118998; BAC43574.1; -; mRNA.
DR EMBL; AF325102; AAK17170.1; -; mRNA.
DR EMBL; BT024920; ABD94076.1; -; mRNA.
DR PIR; T01522; T01522.
DR RefSeq; NP_192129.1; NM_116453.2. [O04259-1]
DR RefSeq; NP_849286.1; NM_178955.1. [O04259-2]
DR AlphaFoldDB; O04259; -.
DR STRING; 3702.AT4G02200.3; -.
DR DNASU; 827516; -.
DR EnsemblPlants; AT4G02200.1; AT4G02200.1; AT4G02200. [O04259-1]
DR EnsemblPlants; AT4G02200.2; AT4G02200.2; AT4G02200. [O04259-2]
DR GeneID; 827516; -.
DR Gramene; AT4G02200.1; AT4G02200.1; AT4G02200. [O04259-1]
DR Gramene; AT4G02200.2; AT4G02200.2; AT4G02200. [O04259-2]
DR KEGG; ath:AT4G02200; -.
DR Araport; AT4G02200; -.
DR eggNOG; ENOG502SN10; Eukaryota.
DR HOGENOM; CLU_072240_0_1_1; -.
DR InParanoid; O04259; -.
DR OMA; EKANRCE; -.
DR PhylomeDB; O04259; -.
DR PRO; PR:O04259; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; O04259; baseline and differential.
DR Genevisible; O04259; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR033347; DI19.
DR InterPro; IPR027935; Di19_C.
DR InterPro; IPR008598; Di19_Zn-bd.
DR PANTHER; PTHR31875; PTHR31875; 1.
DR Pfam; PF14571; Di19_C; 1.
DR Pfam; PF05605; zf-Di19; 1.
PE 1: Evidence at protein level;
KW Alternative splicing; Nucleus; Phosphoprotein; Reference proteome.
FT CHAIN 1..214
FT /note="Protein DEHYDRATION-INDUCED 19 homolog 5"
FT /id="PRO_0000304417"
FT REGION 148..185
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 151..167
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 168..185
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 110
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q39083"
FT VAR_SEQ 201..214
FT /note="GLISSAIFDHIYNF -> AHNPQVT (in isoform 2)"
FT /evidence="ECO:0000305"
FT /id="VSP_034049"
SQ SEQUENCE 214 AA; 24547 MW; ACFD0B9FFBC82546 CRC64;
MEEDLLGICG FDSSKKYRLE ELAKYQSGSC IEFEDDDEMA VDYPCPFCSD DYDLVELCHH
IDEEHQLDAN NGICPVCSRR VKMHMVDHIT TQHRDVFKRL YKDESYSAFS PGTRKYLQSL
IDEPLSTNHT SKSVLDPLLS FIYNPPSPKK SKLVQPDSSS EASMEDNSLI RDSTEKDWES
PSPLSDTELL EKAKKREFVQ GLISSAIFDH IYNF
