DI196_ORYSJ
ID DI196_ORYSJ Reviewed; 208 AA.
AC Q7XBA5; Q65X26; Q94HL4;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 25-MAY-2022, entry version 77.
DE RecName: Full=Protein DEHYDRATION-INDUCED 19 homolog 6;
DE AltName: Full=OsDi19-6;
GN Name=DI19-6; Synonyms=DI1; OrderedLocusNames=Os05g0107900, LOC_Os05g01730;
GN ORFNames=OsJ_016081, OSJNBa0068N01.9;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Yao Q., Peng R., Xiong A.;
RT "Abscisic acid-dependent and -independent regulation of gene expression by
RT progressive drought in Oryza sativa.";
RL Submitted (JUL-2003) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
RA Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
RA Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F.,
RA Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
RT "A fine physical map of the rice chromosome 5.";
RL Mol. Genet. Genomics 274:337-345(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=16786289; DOI=10.1007/s11103-005-5798-7;
RA Rodriguez Milla M.A., Townsend J., Chang I.-F., Cushman J.C.;
RT "The Arabidopsis AtDi19 gene family encodes a novel type of Cys2/His2 zinc-
RT finger protein implicated in ABA-independent dehydration, high-salinity
RT stress and light signaling pathways.";
RL Plant Mol. Biol. 61:13-30(2006).
CC -!- SIMILARITY: Belongs to the Di19 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAU44132.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AY335486; AAP97430.1; -; mRNA.
DR EMBL; AC079022; AAK73130.1; -; Genomic_DNA.
DR EMBL; AC129716; AAU44132.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008211; BAF16341.1; -; Genomic_DNA.
DR EMBL; AP014961; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CM000142; EAZ32598.1; -; Genomic_DNA.
DR RefSeq; XP_015639772.1; XM_015784286.1.
DR AlphaFoldDB; Q7XBA5; -.
DR STRING; 4530.OS05T0107900-01; -.
DR PaxDb; Q7XBA5; -.
DR GeneID; 4337576; -.
DR KEGG; osa:4337576; -.
DR eggNOG; ENOG502RY2K; Eukaryota.
DR HOGENOM; CLU_072240_1_0_1; -.
DR InParanoid; Q7XBA5; -.
DR OrthoDB; 1421864at2759; -.
DR Proteomes; UP000000763; Chromosome 5.
DR Proteomes; UP000007752; Chromosome 5.
DR Proteomes; UP000059680; Chromosome 5.
DR Genevisible; Q7XBA5; OS.
DR InterPro; IPR033347; DI19.
DR InterPro; IPR027935; Di19_C.
DR InterPro; IPR008598; Di19_Zn-bd.
DR PANTHER; PTHR31875; PTHR31875; 1.
DR Pfam; PF14571; Di19_C; 1.
DR Pfam; PF05605; zf-Di19; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..208
FT /note="Protein DEHYDRATION-INDUCED 19 homolog 6"
FT /id="PRO_0000304425"
FT REGION 151..190
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 155..190
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 208 AA; 23649 MW; FA5741C3DECAF06E CRC64;
MASYHQQQGG STFMAIPTIN FQMYSEIAGD DEWWEYIPCP FCYIEVEVHF LCDHLQEEHC
FDMKNAVCPI CADNLDKDTD EHFRVQHSHL LKRRKSSSFS CKPSSAAADK GSYEEDSYFE
APSHCMGRPA PDSSPDPLLS QFICCSLAPP VDSPRRSEAD AEGHGSSSSD DQKRREQGVM
DDASKEELEE RLQRIEFVKQ MLMTTIAY
