DI3L1_XENTR
ID DI3L1_XENTR Reviewed; 1039 AA.
AC Q0P4R5;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 2.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=DIS3-like exonuclease 1;
DE EC=3.1.13.-;
GN Name=dis3l;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Putative cytoplasm-specific catalytic component of the RNA
CC exosome complex which has 3'->5' exoribonuclease activity and
CC participates in a multitude of cellular RNA processing and degradation
CC events. {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC -!- SUBUNIT: Component of the RNA exosome complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RNR ribonuclease family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI21936.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; BC121935; AAI21936.1; ALT_INIT; mRNA.
DR RefSeq; NP_001072835.1; NM_001079367.1.
DR AlphaFoldDB; Q0P4R5; -.
DR SMR; Q0P4R5; -.
DR STRING; 8364.ENSXETP00000034647; -.
DR PaxDb; Q0P4R5; -.
DR DNASU; 780296; -.
DR GeneID; 780296; -.
DR KEGG; xtr:780296; -.
DR CTD; 115752; -.
DR Xenbase; XB-GENE-1013178; dis3l.
DR eggNOG; KOG2102; Eukaryota.
DR InParanoid; Q0P4R5; -.
DR OrthoDB; 1104619at2759; -.
DR Proteomes; UP000008143; Chromosome 3.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0000177; C:cytoplasmic exosome (RNase complex); ISS:UniProtKB.
DR GO; GO:0000178; C:exosome (RNase complex); IBA:GO_Central.
DR GO; GO:0000175; F:3'-5'-exoribonuclease activity; ISS:UniProtKB.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016075; P:rRNA catabolic process; IBA:GO_Central.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR041505; Dis3_CSD2.
DR InterPro; IPR031192; DIS3L.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001900; RNase_II/R.
DR InterPro; IPR022966; RNase_II/R_CS.
DR InterPro; IPR033771; Rrp44_CSD1.
DR PANTHER; PTHR23355:SF30; PTHR23355:SF30; 1.
DR Pfam; PF17849; OB_Dis3; 1.
DR Pfam; PF00773; RNB; 1.
DR Pfam; PF17216; Rrp44_CSD1; 1.
DR SMART; SM00955; RNB; 1.
DR SUPFAM; SSF50249; SSF50249; 3.
DR PROSITE; PS01175; RIBONUCLEASE_II; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Exonuclease; Exosome; Hydrolase; Magnesium; Nuclease;
KW Reference proteome; RNA-binding.
FT CHAIN 1..1039
FT /note="DIS3-like exonuclease 1"
FT /id="PRO_0000314816"
SQ SEQUENCE 1039 AA; 119128 MW; FCBF334EFADF4684 CRC64;
MLKTEKILHL KARGRSVRAV REHYLREDVR CGSALCLTCP RDGKLLSEDL THYVVPDCQI
LQDYLEVLEF PELRGIIIMQ TACQSVQHQR GRRQYKRLCS LLRDTRHDCI LFSNEFQNHA
YLPREMGESA LAWQTRCIYN SCVWYYQHCQ KKIPVVMVTE DKSVIRQYNT ETQEVYVVSF
QIYLETFWPN LKGALELYKS LKETHREREL ESREGNGKEY PEHLPLEILE AGIKSGRYQQ
GVLSVNKHRA QLEGFVRLQG LGGKETDIQS DILIYGTKPR NRAIHGDLVA VELLSRSEWK
GRNGALCENE TDEKAVDAQA EVMPTGRVVG ILQRNWRDYV ATFPAKEDIE TQGKNAQRVL
VMPWDYRIPK IRISTQQAEA LQDYRVVVRI DSWESTSLYP NGHFVRVLGR TGNLEAEIAT
ILVENSISVN PFSEAQLAEM PSNTPESPWQ VKPEEGDRLD LRKTHLVFSI DPKGCEDVDD
ALSIRKLPSG HLELGVHIAD VTHFVPPNTY TDIEARSRAT TYYLADRRYD MLPLILSADL
CSLLGGVDRY AVSVIWEMDS STYEIRRVWY GRTIIRSSYK LSYEVAQQLM DGDLEPLNTE
MELHPLKQDP VRLEQLLWAV GKLTEVAHAT RMRRDMSGAL ELEGVEVRVQ LGEKHSIDDL
VPKQPLQMHE TIAECMILAN HWVAKKIWEC YPQHALLRLH PPARQEFFQE LKECAKARGF
SIDTRSNKAL ADSLDQANDP SDPLVNQLLR MMATQAMSNA RYFSTGSYTE DEFYHYGLAL
EKYTHFTSPI RRYADIVVHR LLLAAVNKGP KDNLLGNKDL EELCRHINVR NRAAQHCQKQ
STELFQCMFF KDKDPDSDQR CISDAVIYGI RTNGVLLFLP RYGIKGAAYL KNIDGLVLAC
KDNGRCHWMP GSLQRLPDRI VVTTQEAKSF SYCLFDHVTV RIHVQSSRFH PDSIRLEIIR
NRPHSSQEAL PSASNPQLAR SELVKEVTRT AVEAQLAVEG AEELKPVEHY QEYRQTQGQS
LYSMLEELWD LALLDVSGA