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ADA_ECOLI
ID   ADA_ECOLI               Reviewed;         354 AA.
AC   P06134; Q47032;
DT   01-JAN-1988, integrated into UniProtKB/Swiss-Prot.
DT   01-FEB-1994, sequence version 2.
DT   03-AUG-2022, entry version 208.
DE   RecName: Full=Bifunctional transcriptional activator/DNA repair enzyme Ada;
DE   AltName: Full=Regulatory protein of adaptive response;
DE   Includes:
DE     RecName: Full=Methylphosphotriester-DNA--protein-cysteine S-methyltransferase;
DE              EC=2.1.1.n11 {ECO:0000269|PubMed:2987862};
DE     AltName: Full=Methylphosphotriester-DNA methyltransferase;
DE   Includes:
DE     RecName: Full=Methylated-DNA--protein-cysteine methyltransferase;
DE              EC=2.1.1.63 {ECO:0000269|PubMed:2987862};
DE     AltName: Full=O6-methylguanine-DNA alkyltransferase;
GN   Name=ada; OrderedLocusNames=b2213, JW2201;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PARTIAL PROTEIN SEQUENCE.
RC   STRAIN=K12;
RX   PubMed=2987251; DOI=10.1016/s0021-9258(17)39604-7;
RA   Nakabeppu Y., Kondo H., Kawabata S., Iwanaga S., Sekiguchi M.;
RT   "Purification and structure of the intact Ada regulatory protein of
RT   Escherichia coli K12, O6-methylguanine-DNA methyltransferase.";
RL   J. Biol. Chem. 260:7281-7288(1985).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=B;
RX   PubMed=3887409; DOI=10.1073/pnas.82.9.2688;
RA   Demple B., Sedgwick B., Robins P., Totty N., Waterfield M.D., Lindahl T.;
RT   "Active site and complete sequence of the suicidal methyltransferase that
RT   counters alkylation mutagenesis.";
RL   Proc. Natl. Acad. Sci. U.S.A. 82:2688-2692(1985).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / BHB2600;
RA   Richterich P., Lakey N., Gryan G., Jaehn L., Mintz L., Robison K.,
RA   Church G.M.;
RT   "Automated multiplex sequencing of the E.coli genome.";
RL   Submitted (OCT-1993) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=9097040; DOI=10.1093/dnares/3.6.379;
RA   Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K.,
RA   Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T.,
RA   Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S., Nakamura Y.,
RA   Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y.,
RA   Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y.,
RA   Horiuchi T.;
RT   "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT   the 40.1-50.0 min region on the linkage map.";
RL   DNA Res. 3:379-392(1996).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [6]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [7]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-49.
RC   STRAIN=K12;
RX   PubMed=2982792; DOI=10.1128/jb.161.3.888-895.1985;
RA   Lemotte P.K., Walker G.C.;
RT   "Induction and autoregulation of ada, a positively acting element
RT   regulating the response of Escherichia coli K-12 to methylating agents.";
RL   J. Bacteriol. 161:888-895(1985).
RN   [8]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 287-354.
RX   PubMed=3536913; DOI=10.1016/s0021-9258(18)66785-7;
RA   Kondo H., Nakabeppu Y., Kataoka H., Kuhara S., Kawabata S., Sekiguchi M.;
RT   "Structure and expression of the alkB gene of Escherichia coli related to
RT   the repair of alkylated DNA.";
RL   J. Biol. Chem. 261:15772-15777(1986).
RN   [9]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-29.
RX   PubMed=3009022; DOI=10.1016/0092-8674(86)90396-x;
RA   Teo I., Sedgwick B., Kilpatrick M.W., McCarthy T.V., Lindahl T.;
RT   "The intracellular signal for induction of resistance to alkylating agents
RT   in E. coli.";
RL   Cell 45:315-324(1986).
RN   [10]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-27.
RX   PubMed=3529081; DOI=10.1073/pnas.83.17.6297;
RA   Nakabeppu Y., Sekiguchi M.;
RT   "Regulatory mechanisms for induction of synthesis of repair enzymes in
RT   response to alkylating agents: ada protein acts as a transcriptional
RT   regulator.";
RL   Proc. Natl. Acad. Sci. U.S.A. 83:6297-6301(1986).
RN   [11]
RP   FUNCTION, AND CATALYTIC ACTIVITY.
RX   PubMed=2987862; DOI=10.1093/nar/13.8.2683;
RA   McCarthy T.V., Lindahl T.;
RT   "Methyl phosphotriesters in alkylated DNA are repaired by the Ada
RT   regulatory protein of E. coli.";
RL   Nucleic Acids Res. 13:2683-2698(1985).
RN   [12]
RP   DOMAIN.
RX   PubMed=3162236; DOI=10.1016/s0021-9258(18)68944-6;
RA   Sedgwick B., Robins P., Totty N., Lindahl T.;
RT   "Functional domains and methyl acceptor sites of the Escherichia coli Ada
RT   protein.";
RL   J. Biol. Chem. 263:4430-4433(1988).
RN   [13]
RP   ZINC-BINDING.
RX   PubMed=1581309; DOI=10.1021/bi00134a002;
RA   Myers L.C., Terranova M.P., Nash H.M., Markus M.A., Verdine G.L.;
RT   "Zinc binding by the methylation signaling domain of the Escherichia coli
RT   Ada protein.";
RL   Biochemistry 31:4541-4547(1992).
RN   [14]
RP   CHARACTERIZATION.
RX   PubMed=8202360; DOI=10.1093/nar/22.9.1613;
RA   Liem L.-K., Lim A., Li B.F.L.;
RT   "Specificities of human, rat and E. coli O6-methylguanine-DNA
RT   methyltransferases towards the repair of O6-methyl and O6-ethylguanine in
RT   DNA.";
RL   Nucleic Acids Res. 22:1613-1619(1994).
RN   [15]
RP   IDENTIFICATION BY 2D-GEL.
RX   PubMed=9298644; DOI=10.1002/elps.1150180805;
RA   VanBogelen R.A., Abshire K.Z., Moldover B., Olson E.R., Neidhardt F.C.;
RT   "Escherichia coli proteome analysis using the gene-protein database.";
RL   Electrophoresis 18:1243-1251(1997).
RN   [16]
RP   STRUCTURE BY NMR OF 1-129.
RX   PubMed=8500619; DOI=10.1016/0014-5793(93)81351-y;
RA   Sakashita H., Sakuma T., Ohkubo T., Kainosho M., Sakumi K., Sekiguchi M.,
RA   Morikawa K.;
RT   "Folding topology and DNA binding of the N-terminal fragment of Ada
RT   protein.";
RL   FEBS Lett. 323:252-256(1993).
RN   [17]
RP   STRUCTURE BY NMR OF 1-92 IN COMPLEX WITH ZINC IONS.
RX   PubMed=8395079; DOI=10.1126/science.8395079;
RA   Myers L.C., Terranova M.P., Ferentz A.E., Wagner G., Verdine G.L.;
RT   "Repair of DNA methylphosphotriesters through a metalloactivated cysteine
RT   nucleophile.";
RL   Science 261:1164-1167(1993).
RN   [18]
RP   X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF 175-354.
RC   STRAIN=B;
RX   PubMed=8156986; DOI=10.1002/j.1460-2075.1994.tb06410.x;
RA   Moore M.H., Gulbis J.M., Dodson E.J., Demple B., Moody P.C.E.;
RT   "Crystal structure of a suicidal DNA repair protein: the Ada O6-
RT   methylguanine-DNA methyltransferase from E. coli.";
RL   EMBO J. 13:1495-1501(1994).
RN   [19]
RP   STRUCTURE BY NMR OF 1-92 IN COMPLEX WITH ZINC IONS, AND INTERACTION WITH
RP   DNA.
RX   PubMed=11284682; DOI=10.1021/bi002109p;
RA   Lin Y., Doetsch V., Wintner T., Peariso K., Myers L.C., Penner-Hahn J.E.,
RA   Verdine G.L., Wagner G.;
RT   "Structural basis for the functional switch of the E. coli Ada protein.";
RL   Biochemistry 40:4261-4271(2001).
RN   [20]
RP   X-RAY CRYSTALLOGRAPHY (2.1 ANGSTROMS) OF 9-139 IN COMPLEX WITH DNA AND ZINC
RP   IONS, STRUCTURE BY NMR OF 9-139, IDENTIFICATION BY MASS SPECTROMETRY, AND
RP   ACTIVE SITE.
RX   PubMed=16209950; DOI=10.1016/j.molcel.2005.08.013;
RA   He C., Hus J.-C., Sun L.J., Zhou P., Norman D.P.G., Doetsch V., Wei H.,
RA   Gross J.D., Lane W.S., Wagner G., Verdine G.L.;
RT   "A methylation-dependent electrostatic switch controls DNA repair and
RT   transcriptional activation by E. coli ada.";
RL   Mol. Cell 20:117-129(2005).
RN   [21]
RP   STRUCTURE BY NMR OF 1-146 IN COMPLEX WITH ZINC IONS, IDENTIFICATION BY MASS
RP   SPECTROMETRY, AND ACTIVE SITE CYS-38.
RX   PubMed=16452614; DOI=10.1110/ps.051786306;
RA   Takinowaki H., Matsuda Y., Yoshida T., Kobayashi Y., Ohkubo T.;
RT   "The solution structure of the methylated form of the N-terminal 16-kDa
RT   domain of Escherichia coli Ada protein.";
RL   Protein Sci. 15:487-497(2006).
CC   -!- FUNCTION: Involved in the adaptive response to alkylation damage in DNA
CC       caused by alkylating agents. Repairs O6-methylguanine (O6-MeG) and O4-
CC       methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA
CC       by stoichiometrically transferring the methyl group to a cysteine
CC       residue in the enzyme (Cys-321). Also specifically repairs the Sp
CC       diastereomer of DNA methylphosphotriester lesions by the same
CC       mechanism, although the methyl transfer occurs onto a different
CC       cysteine residue (Cys-38). Cannot demethylate the other diastereomer,
CC       Rp-methylphosphotriester. This is a suicide reaction: the enzyme is
CC       irreversibly inactivated. {ECO:0000269|PubMed:2987862}.
CC   -!- FUNCTION: The methylation of Ada by methylphosphotriesters in DNA leads
CC       to its activation as a transcriptional regulator that activates the
CC       transcription of its own gene, ada, and other alkylation resistance
CC       genes, alkA, alkB and aidB. {ECO:0000269|PubMed:2987862}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=(2'-deoxyribonucleoside 5'-methylphosphotriester)-DNA + L-
CC         cysteinyl-[protein] = 2'-deoxyribonucleotide-DNA + H(+) + S-methyl-L-
CC         cysteinyl-[protein]; Xref=Rhea:RHEA:56324, Rhea:RHEA-COMP:10131,
CC         Rhea:RHEA-COMP:10132, Rhea:RHEA-COMP:14462, Rhea:RHEA-COMP:14463,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:29950, ChEBI:CHEBI:82612,
CC         ChEBI:CHEBI:140284, ChEBI:CHEBI:140286; EC=2.1.1.n11;
CC         Evidence={ECO:0000269|PubMed:2987862};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 6-O-methyl-2'-deoxyguanosine in DNA + L-cysteinyl-[protein]
CC         = a 2'-deoxyguanosine in DNA + S-methyl-L-cysteinyl-[protein];
CC         Xref=Rhea:RHEA:24000, Rhea:RHEA-COMP:10131, Rhea:RHEA-COMP:10132,
CC         Rhea:RHEA-COMP:11367, Rhea:RHEA-COMP:11368, ChEBI:CHEBI:29950,
CC         ChEBI:CHEBI:82612, ChEBI:CHEBI:85445, ChEBI:CHEBI:85448; EC=2.1.1.63;
CC         Evidence={ECO:0000255|PROSITE-ProRule:PRU10017,
CC         ECO:0000269|PubMed:2987862};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 4-O-methyl-thymidine in DNA + L-cysteinyl-[protein] = a
CC         thymidine in DNA + S-methyl-L-cysteinyl-[protein];
CC         Xref=Rhea:RHEA:53428, Rhea:RHEA-COMP:10131, Rhea:RHEA-COMP:10132,
CC         Rhea:RHEA-COMP:13555, Rhea:RHEA-COMP:13556, ChEBI:CHEBI:29950,
CC         ChEBI:CHEBI:82612, ChEBI:CHEBI:137386, ChEBI:CHEBI:137387;
CC         EC=2.1.1.63; Evidence={ECO:0000255|PROSITE-ProRule:PRU10017,
CC         ECO:0000269|PubMed:2987862};
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC       Note=Binds 1 zinc ion per subunit.;
CC   -!- INTERACTION:
CC       P06134; P69931: hda; NbExp=3; IntAct=EBI-1119501, EBI-545453;
CC   -!- INDUCTION: Up-regulated by methylated Ada itself in response to the
CC       exposure to alkylating agents.
CC   -!- DOMAIN: Consists of two domains. The 20 kDa N-terminal domain repairs
CC       the Sp diastereomer of methylphosphotriesters and, in its methylated
CC       form, binds DNA in a sequence-specific manner. The 19 kDa C-terminal
CC       domain repairs the mutagenic lesions O6-methylguanine. Each domain
CC       retains its activity when separated form the other.
CC       {ECO:0000269|PubMed:3162236}.
CC   -!- MISCELLANEOUS: This enzyme catalyzes only one turnover and therefore is
CC       not strictly catalytic. According to one definition, an enzyme is a
CC       biocatalyst that acts repeatedly and over many reaction cycles.
CC   -!- SIMILARITY: In the C-terminal section; belongs to the MGMT family.
CC       {ECO:0000305}.
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DR   EMBL; M10211; AAA23412.1; -; Genomic_DNA.
DR   EMBL; M10315; AAA23413.1; -; Genomic_DNA.
DR   EMBL; U00008; AAA16408.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC75273.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAA15996.1; -; Genomic_DNA.
DR   EMBL; J02607; AAA23415.1; -; Genomic_DNA.
DR   EMBL; M13155; AAA23418.1; -; Genomic_DNA.
DR   EMBL; M13828; AAA23417.1; -; Genomic_DNA.
DR   PIR; C64991; XYECO2.
DR   RefSeq; NP_416717.1; NC_000913.3.
DR   RefSeq; WP_000710375.1; NZ_LN832404.1.
DR   PDB; 1ADN; NMR; -; A=1-92.
DR   PDB; 1EYF; NMR; -; A=1-92.
DR   PDB; 1SFE; X-ray; 2.10 A; A=175-354.
DR   PDB; 1U8B; X-ray; 2.10 A; A=9-139.
DR   PDB; 1WPK; NMR; -; A=1-146.
DR   PDB; 1ZGW; NMR; -; A=1-139.
DR   PDBsum; 1ADN; -.
DR   PDBsum; 1EYF; -.
DR   PDBsum; 1SFE; -.
DR   PDBsum; 1U8B; -.
DR   PDBsum; 1WPK; -.
DR   PDBsum; 1ZGW; -.
DR   AlphaFoldDB; P06134; -.
DR   SMR; P06134; -.
DR   BioGRID; 4261923; 99.
DR   BioGRID; 851051; 4.
DR   DIP; DIP-9055N; -.
DR   IntAct; P06134; 13.
DR   STRING; 511145.b2213; -.
DR   jPOST; P06134; -.
DR   PaxDb; P06134; -.
DR   PRIDE; P06134; -.
DR   EnsemblBacteria; AAC75273; AAC75273; b2213.
DR   EnsemblBacteria; BAA15996; BAA15996; BAA15996.
DR   GeneID; 946710; -.
DR   KEGG; ecj:JW2201; -.
DR   KEGG; eco:b2213; -.
DR   PATRIC; fig|1411691.4.peg.22; -.
DR   EchoBASE; EB0028; -.
DR   eggNOG; COG0350; Bacteria.
DR   eggNOG; COG2169; Bacteria.
DR   HOGENOM; CLU_000445_52_0_6; -.
DR   InParanoid; P06134; -.
DR   OMA; RFAIGQC; -.
DR   PhylomeDB; P06134; -.
DR   BioCyc; EcoCyc:PD00230; -.
DR   BioCyc; MetaCyc:PD00230; -.
DR   EvolutionaryTrace; P06134; -.
DR   PRO; PR:P06134; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; TAS:EcoCyc.
DR   GO; GO:0003908; F:methylated-DNA-[protein]-cysteine S-methyltransferase activity; IDA:EcoCyc.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IDA:EcoliWiki.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:EcoCyc.
DR   GO; GO:0006307; P:DNA dealkylation involved in DNA repair; IDA:EcoliWiki.
DR   GO; GO:0080111; P:DNA demethylation; IDA:EcoCyc.
DR   GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:EcoCyc.
DR   GO; GO:0018125; P:peptidyl-cysteine methylation; IDA:EcoCyc.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:EcoCyc.
DR   CDD; cd06445; ATase; 1.
DR   Gene3D; 1.10.10.10; -; 1.
DR   Gene3D; 3.40.10.10; -; 1.
DR   InterPro; IPR035451; Ada-like_dom_sf.
DR   InterPro; IPR004026; Ada_DNA_repair_Zn-bd.
DR   InterPro; IPR016221; Bifunct_regulatory_prot_Ada.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR001497; MethylDNA_cys_MeTrfase_AS.
DR   InterPro; IPR014048; MethylDNA_cys_MeTrfase_DNA-bd.
DR   InterPro; IPR036217; MethylDNA_cys_MeTrfase_DNAb.
DR   InterPro; IPR008332; MethylG_MeTrfase_N.
DR   InterPro; IPR036631; MGMT_N_sf.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   Pfam; PF02805; Ada_Zn_binding; 1.
DR   Pfam; PF01035; DNA_binding_1; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   Pfam; PF02870; Methyltransf_1N; 1.
DR   PIRSF; PIRSF000409; Ada; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 1.
DR   SUPFAM; SSF46767; SSF46767; 1.
DR   SUPFAM; SSF53155; SSF53155; 1.
DR   SUPFAM; SSF57884; SSF57884; 1.
DR   TIGRFAMs; TIGR00589; ogt; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 2.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
DR   PROSITE; PS00374; MGMT; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Activator; Direct protein sequencing; DNA damage; DNA repair;
KW   DNA-binding; Metal-binding; Methyltransferase; Multifunctional enzyme;
KW   Reference proteome; Transcription; Transcription regulation; Transferase;
KW   Zinc.
FT   CHAIN           1..354
FT                   /note="Bifunctional transcriptional activator/DNA repair
FT                   enzyme Ada"
FT                   /id="PRO_0000018747"
FT   DOMAIN          85..183
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   DNA_BIND        102..121
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   REGION          1..171
FT                   /note="Methylphosphotriester-DNA--protein-cysteine
FT                   methyltransferase"
FT   REGION          181..354
FT                   /note="Methylated-DNA--protein-cysteine methyltransferase"
FT   ACT_SITE        38
FT                   /note="Nucleophile; methyl group acceptor from
FT                   methylphosphotriester"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU10017,
FT                   ECO:0000269|PubMed:16452614"
FT   ACT_SITE        321
FT                   /note="Nucleophile; methyl group acceptor from either O6-
FT                   methylguanine or O4-methylthymine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU10017,
FT                   ECO:0000269|PubMed:16209950"
FT   BINDING         34
FT                   /ligand="DNA"
FT                   /ligand_id="ChEBI:CHEBI:16991"
FT                   /evidence="ECO:0000269|PubMed:16209950"
FT   BINDING         38
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT   BINDING         42
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT   BINDING         43
FT                   /ligand="DNA"
FT                   /ligand_id="ChEBI:CHEBI:16991"
FT                   /evidence="ECO:0000269|PubMed:16209950"
FT   BINDING         45
FT                   /ligand="DNA"
FT                   /ligand_id="ChEBI:CHEBI:16991"
FT                   /evidence="ECO:0000269|PubMed:16209950"
FT   BINDING         67
FT                   /ligand="DNA"
FT                   /ligand_id="ChEBI:CHEBI:16991"
FT                   /evidence="ECO:0000269|PubMed:16209950"
FT   BINDING         69
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT   BINDING         72
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT   SITE            128..129
FT                   /note="Cleavage"
FT   SITE            178..179
FT                   /note="Cleavage"
FT   VARIANT         75
FT                   /note="E -> D (in strain: B)"
FT   VARIANT         79..80
FT                   /note="AQ -> PR (in strain: B)"
FT   VARIANT         318
FT                   /note="I -> V (in strain: B)"
FT   VARIANT         330
FT                   /note="T -> S (in strain: B)"
FT   CONFLICT        134
FT                   /note="A -> R (in Ref. 1; AAA23412)"
FT                   /evidence="ECO:0000305"
FT   STRAND          4..6
FT                   /evidence="ECO:0007829|PDB:1ZGW"
FT   HELIX           9..17
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           21..23
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   TURN            24..26
FT                   /evidence="ECO:0007829|PDB:1EYF"
FT   STRAND          27..31
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   TURN            32..34
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   STRAND          36..38
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           49..51
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   STRAND          52..57
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           58..63
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   STRAND          67..69
FT                   /evidence="ECO:0007829|PDB:1WPK"
FT   TURN            70..72
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   STRAND          76..78
FT                   /evidence="ECO:0007829|PDB:1ADN"
FT   HELIX           79..93
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   STRAND          96..98
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           102..109
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           113..123
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   HELIX           128..137
FT                   /evidence="ECO:0007829|PDB:1U8B"
FT   TURN            142..144
FT                   /evidence="ECO:0007829|PDB:1WPK"
FT   STRAND          190..196
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   STRAND          199..205
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   STRAND          207..217
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           219..229
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           240..254
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   STRAND          255..257
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           270..279
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           290..296
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           303..311
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           321..323
FT                   /evidence="ECO:0007829|PDB:1SFE"
FT   HELIX           338..348
FT                   /evidence="ECO:0007829|PDB:1SFE"
SQ   SEQUENCE   354 AA;  39324 MW;  4163E585C768C2F4 CRC64;
     MKKATCLTDD QRWQSVLARD PNADGEFVFA VRTTGIFCRP SCRARHALRE NVSFYANASE
     ALAAGFRPCK RCQPEKANAQ QHRLDKITHA CRLLEQETPV TLEALADQVA MSPFHLHRLF
     KATTGMTPKA WQQAWRARRL RESLAKGESV TTSILNAGFP DSSSYYRKAD ETLGMTAKQF
     RHGGENLAVR YALADCELGR CLVAESERGI CAILLGDDDA TLISELQQMF PAADNAPADL
     MFQQHVREVI ASLNQRDTPL TLPLDIRGTA FQQQVWQALR TIPCGETVSY QQLANAIGKP
     KAVRAVASAC AANKLAIIIP CHRVVRGDGT LSGYRWGVSR KAQLLRREAE NEER
 
 
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