DIM_PEA
ID DIM_PEA Reviewed; 567 AA.
AC P93472; Q9ATR0;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Delta(24)-sterol reductase;
DE EC=1.3.1.72;
DE AltName: Full=Cell elongation protein diminuto;
GN Name=DIM; Synonyms=LKB;
OS Pisum sativum (Garden pea).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Fabeae; Pisum.
OX NCBI_TaxID=3888;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Alaska;
RA Shimizu S., Mori H.;
RT "A cDNA from Pisum sativum encoding the DIMINUTO homologue.";
RL (er) Plant Gene Register PGR96-079(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INDUCTION, AND MUTAGENESIS OF ARG-24.
RC STRAIN=cv. Torsdag;
RX PubMed=11669574; DOI=10.1023/a:1011894812794;
RA Schultz L., Kerckhoffs L.H., Klahre U., Yokota T., Reid J.B.;
RT "Molecular characterization of the brassinosteroid-deficient lkb mutant in
RT pea.";
RL Plant Mol. Biol. 47:491-498(2001).
RN [3]
RP FUNCTION, AND CATALYTIC ACTIVITY.
RC STRAIN=cv. Torsdag;
RX PubMed=10198111; DOI=10.1104/pp.119.4.1517;
RA Nomura T., Kitasaka Y., Takatsuto S., Reid J.B., Fukami M., Yokota T.;
RT "Brassinosteroid/Sterol synthesis and plant growth as affected by lka and
RT lkb mutations of Pea.";
RL Plant Physiol. 119:1517-1526(1999).
CC -!- FUNCTION: Plays a critical role in the general process of plant cell
CC elongation. {ECO:0000269|PubMed:10198111, ECO:0000269|PubMed:11669574}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=lathosterol + NADP(+) = 5alpha-cholesta-7,24-dien-3beta-ol +
CC H(+) + NADPH; Xref=Rhea:RHEA:13685, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16290, ChEBI:CHEBI:17168, ChEBI:CHEBI:57783,
CC ChEBI:CHEBI:58349; EC=1.3.1.72;
CC Evidence={ECO:0000269|PubMed:10198111};
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Highly expressed in the apical region and root tips
CC and lower levels in immature and mature internodes and leaves.
CC {ECO:0000269|Ref.1}.
CC -!- INDUCTION: Not induced by brassinolide. {ECO:0000269|PubMed:11669574}.
CC -!- SIMILARITY: Belongs to the DIMINUTO family. {ECO:0000305}.
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DR EMBL; D86494; BAA13096.1; -; mRNA.
DR EMBL; AF325121; AAK15493.1; -; mRNA.
DR PIR; T06575; T06575.
DR AlphaFoldDB; P93472; -.
DR SMR; P93472; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
DR GO; GO:0050614; F:delta24-sterol reductase activity; IEA:UniProtKB-EC.
DR GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR Gene3D; 3.30.465.10; -; 1.
DR InterPro; IPR040165; Diminuto-like.
DR InterPro; IPR016166; FAD-bd_PCMH.
DR InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR InterPro; IPR006094; Oxid_FAD_bind_N.
DR PANTHER; PTHR10801; PTHR10801; 1.
DR Pfam; PF01565; FAD_binding_4; 1.
DR SUPFAM; SSF56176; SSF56176; 1.
DR PROSITE; PS51387; FAD_PCMH; 1.
PE 1: Evidence at protein level;
KW Calmodulin-binding; Membrane; NADP; Oxidoreductase; Signal-anchor;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..567
FT /note="Delta(24)-sterol reductase"
FT /id="PRO_0000219496"
FT TOPO_DOM 1..24
FT /note="Lumenal"
FT /evidence="ECO:0000255"
FT TRANSMEM 25..45
FT /note="Helical; Signal-anchor"
FT /evidence="ECO:0000255"
FT TOPO_DOM 46..567
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 45..231
FT /note="FAD-binding PCMH-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00718"
FT REGION 520..541
FT /note="Interaction with calmodulin"
FT /evidence="ECO:0000250"
FT REGION 548..567
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VARIANT 360
FT /note="S -> W (in strain: cv. Torsdag)"
FT VARIANT 411
FT /note="S -> V (in strain: cv. Torsdag)"
FT VARIANT 417
FT /note="I -> V (in strain: cv. Torsdag)"
FT VARIANT 560
FT /note="P -> A (in strain: cv. Torsdag)"
FT VARIANT 566
FT /note="P -> A (in strain: cv. Torsdag)"
FT MUTAGEN 24
FT /note="R->K: In lkb; decreased activity."
FT /evidence="ECO:0000269|PubMed:11669574"
SQ SEQUENCE 567 AA; 65975 MW; 7316A313ED88EF86 CRC64;
MSDLEAPLRP KRKKIWVDYF VKFRWILVIF VVLPISFTLY FLTYLGDVRS EWKSFKTRQK
EHDENVQKVV NRLKKRNPSK DGLVCTARKP WVAVGMRNVD YKRARHFEVD LSPFRNILDI
DKERMIARVE PLVNMGQITR VTVPMNLALA VVAELDDLTV GGLINGYGIE GSSHKYGLFS
DTVVAFEIIL ADGSLVKATK DNEYSDLFYA IPWSQGTLGL LVAAEVKLIP IKEYMKLTYK
PVVGNLKDIA QAYSDSFAPR DGDQDNDEKV PDFVETMIYS PTRAVCMTGR YASKEEAKKK
GNKINNVGWW YKTWFYQHAE TALKKGLFVE YIPTREYYHR HTRCLYWEGK LILPFGDQFS
FRFLFGWLMP PKVSLLKATQ GEAIRNYYHE MHVIQDMLVP LYKVGDALEW SDREMEIYPI
WLCPHKLFKL PIKTMIYPEA GFELQRRQGD TQNAQMFTDV GVYYAPGPVL RGEVFDGAEA
VRKMESWMIE NHCFQPQYAV SELNEKNFWR MFDAGLYEHC RRKYGAVGTF MSVYYKCKKG
RKTEKEVREA EQAHLDTAYP EVDQPPD