DIT_BPT5
ID DIT_BPT5 Reviewed; 204 AA.
AC Q6QGE8;
DT 29-APR-2015, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=Distal tail protein pb9 {ECO:0000303|PubMed:24198424};
DE Short=DTP-pb9 {ECO:0000305};
DE Short=Dit {ECO:0000303|PubMed:24198424};
DE AltName: Full=Tail protein pb9 {ECO:0000303|PubMed:24198424};
GN Name=D16;
GN ORFNames=ORF128 {ECO:0000312|EMBL:AAX12065.1},
GN T5.139 {ECO:0000312|EMBL:AAQ92755.1}, T5p135 {ECO:0000312|EMBL:AAU05274.1};
OS Escherichia phage T5 (Enterobacteria phage T5).
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
OX NCBI_TaxID=2695836;
OH NCBI_TaxID=562; Escherichia coli.
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Ksenzenko V.N., Kaliman A.V., Krutilina A.I., Shlyapnikov M.G.;
RT "Bacteriophage T5 complete genome.";
RL Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND INDUCTION.
RC STRAIN=ATCC 11303-B5 {ECO:0000312|EMBL:AAX12065.1};
RX PubMed=15661140; DOI=10.1016/j.virol.2004.10.049;
RA Wang J., Jiang Y., Vincent M., Sun Y., Yu H., Wang J., Bao Q., Kong H.,
RA Hu S.;
RT "Complete genome sequence of bacteriophage T5.";
RL Virology 332:45-65(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], SUBCELLULAR LOCATION,
RP FUNCTION, AND SUBUNIT.
RC STRAIN=St0 deletion mutant;
RX PubMed=24198424; DOI=10.1128/jvi.02262-13;
RA Zivanovic Y., Confalonieri F., Ponchon L., Lurz R., Chami M., Flayhan A.,
RA Renouard M., Huet A., Decottignies P., Davidson A.R., Breyton C.,
RA Boulanger P.;
RT "Insights into bacteriophage T5 structure from analysis of its
RT morphogenesis genes and protein components.";
RL J. Virol. 88:1162-1174(2014).
RN [4] {ECO:0000312|PDB:4JMQ}
RP X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS).
RX PubMed=24155371; DOI=10.1128/jvi.02135-13;
RA Flayhan A., Vellieux F.M., Lurz R., Maury O., Contreras-Martel C.,
RA Girard E., Boulanger P., Breyton C.;
RT "Crystal structure of pb9, the distal tail protein of bacteriophage T5: a
RT conserved structural motif among all siphophages.";
RL J. Virol. 88:820-828(2014).
CC -!- FUNCTION: Distal tail protein which forms a hexameric ring located at
CC the tail tube end. {ECO:0000269|PubMed:24198424}.
CC -!- SUBUNIT: Homohexamer. {ECO:0000269|PubMed:24198424}.
CC -!- SUBCELLULAR LOCATION: Virion. Note=Component of the tail.
CC {ECO:0000269|PubMed:24198424}.
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DR EMBL; AY543070; AAQ92755.1; -; Genomic_DNA.
DR EMBL; AY692264; AAU05274.1; -; Genomic_DNA.
DR EMBL; AY587007; AAX12065.1; -; Genomic_DNA.
DR RefSeq; YP_006967.1; NC_005859.1.
DR PDB; 4JMQ; X-ray; 1.90 A; A/B/C/D=1-204.
DR PDB; 5MF2; X-ray; 2.00 A; A/B/C/D=1-204.
DR PDB; 6F2M; X-ray; 1.80 A; A/B/C/D=1-204.
DR PDBsum; 4JMQ; -.
DR PDBsum; 5MF2; -.
DR PDBsum; 6F2M; -.
DR SMR; Q6QGE8; -.
DR GeneID; 2777628; -.
DR KEGG; vg:2777628; -.
DR Proteomes; UP000002107; Genome.
DR Proteomes; UP000002141; Genome.
DR Proteomes; UP000002503; Genome.
DR GO; GO:0098015; C:virus tail; IDA:UniProtKB.
DR GO; GO:0098025; C:virus tail, baseplate; IDA:CACAO.
PE 1: Evidence at protein level;
KW 3D-structure; Late protein; Reference proteome; Viral tail protein; Virion.
FT CHAIN 1..204
FT /note="Distal tail protein pb9"
FT /id="PRO_0000432947"
FT TURN 6..8
FT /evidence="ECO:0007829|PDB:6F2M"
FT HELIX 13..15
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 18..25
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 47..53
FT /evidence="ECO:0007829|PDB:6F2M"
FT HELIX 59..74
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 79..82
FT /evidence="ECO:0007829|PDB:6F2M"
FT HELIX 84..86
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 91..93
FT /evidence="ECO:0007829|PDB:6F2M"
FT HELIX 95..97
FT /evidence="ECO:0007829|PDB:4JMQ"
FT STRAND 106..112
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 117..119
FT /evidence="ECO:0007829|PDB:4JMQ"
FT STRAND 126..129
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 135..144
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 147..154
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 172..178
FT /evidence="ECO:0007829|PDB:6F2M"
FT HELIX 180..182
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 191..193
FT /evidence="ECO:0007829|PDB:6F2M"
FT STRAND 197..202
FT /evidence="ECO:0007829|PDB:6F2M"
SQ SEQUENCE 204 AA; 22778 MW; 23DC7D317D5E3816 CRC64;
MRLPDPYTNP EYPGLGFESV NLVDNDPMIR DELPNGKVKE VKISAQYWGI NISYPELFPD
EYAFLDSRLL EYKRTGDYLD VLLPQYEAFR VRGDTKSVTI PAGQKGSQII LNTNGTLTGQ
PKAGDLFKLS THPKVYKITN FSSSGNVWNI SLYPDLFITT TGSEKPVFNG ILFRTKLMNG
DSFGSTLNNN GTYSGISLSL RESL