DJC16_ORYSJ
ID DJC16_ORYSJ Reviewed; 476 AA.
AC A0A0P0VG31; B9F3U6; Q0E340; Q6H7Q3;
DT 30-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 20-JAN-2016, sequence version 1.
DT 25-MAY-2022, entry version 40.
DE RecName: Full=DnaJ protein P58IPK homolog A {ECO:0000305};
DE Short=OsP58A {ECO:0000303|PubMed:24153418};
DE AltName: Full=Chaperone protein dnaJ C16 {ECO:0000305};
DE Short=OsDjC16 {ECO:0000303|PubMed:23160806};
DE Flags: Precursor;
GN Name=P58A {ECO:0000303|PubMed:24153418}; Synonyms=DJC16 {ECO:0000305};
GN OrderedLocusNames=Os02g0195300 {ECO:0000312|EMBL:BAS77447.1},
GN LOC_Os02g10180 {ECO:0000305};
GN ORFNames=OJ1225_F07.10 {ECO:0000312|EMBL:BAD25246.1},
GN OsJ_05745 {ECO:0000312|EMBL:EEE56498.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=23160806; DOI=10.1007/s12192-012-0384-9;
RA Sarkar N.K., Thapar U., Kundnani P., Panwar P., Grover A.;
RT "Functional relevance of J-protein family of rice (Oryza sativa).";
RL Cell Stress Chaperones 18:321-331(2013).
RN [6]
RP FUNCTION, INTERACTION WITH BIP1, AND SUBCELLULAR LOCATION.
RX PubMed=24153418; DOI=10.1093/jxb/ert312;
RA Ohta M., Wakasa Y., Takahashi H., Hayashi S., Kudo K., Takaiwa F.;
RT "Analysis of rice ER-resident J-proteins reveals diversity and functional
RT differentiation of the ER-resident Hsp70 system in plants.";
RL J. Exp. Bot. 64:5429-5441(2013).
CC -!- FUNCTION: May play a role in protein folding in the endoplasmic
CC reticulum. {ECO:0000305|PubMed:24153418}.
CC -!- SUBUNIT: Interacts with BIP1. {ECO:0000269|PubMed:24153418}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum lumen
CC {ECO:0000269|PubMed:24153418}. Note=Localizes to the endoplasmic
CC reticulum (ER) and to punctae around the ER.
CC {ECO:0000269|PubMed:24153418}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD25246.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF08098.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=EEE56498.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AP004184; BAD25246.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008208; BAF08098.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014958; BAS77447.1; -; Genomic_DNA.
DR EMBL; CM000139; EEE56498.1; ALT_INIT; Genomic_DNA.
DR RefSeq; XP_015625609.1; XM_015770123.1.
DR RefSeq; XP_015625610.1; XM_015770124.1.
DR AlphaFoldDB; A0A0P0VG31; -.
DR SMR; A0A0P0VG31; -.
DR STRING; 4530.OS02T0195300-01; -.
DR PaxDb; A0A0P0VG31; -.
DR EnsemblPlants; Os02t0195300-01; Os02t0195300-01; Os02g0195300.
DR GeneID; 4328607; -.
DR Gramene; Os02t0195300-01; Os02t0195300-01; Os02g0195300.
DR KEGG; osa:4328607; -.
DR eggNOG; KOG0550; Eukaryota.
DR OMA; EILFSMM; -.
DR OrthoDB; 1106865at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR GO; GO:0005788; C:endoplasmic reticulum lumen; IDA:UniProtKB.
DR CDD; cd06257; DnaJ; 1.
DR Gene3D; 1.10.287.110; -; 1.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR001623; DnaJ_domain.
DR InterPro; IPR018253; DnaJ_domain_CS.
DR InterPro; IPR036869; J_dom_sf.
DR InterPro; IPR044620; P58IPK-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR013105; TPR_2.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR45188; PTHR45188; 1.
DR Pfam; PF00226; DnaJ; 1.
DR Pfam; PF07719; TPR_2; 1.
DR PRINTS; PR00625; JDOMAIN.
DR SMART; SM00271; DnaJ; 1.
DR SMART; SM00028; TPR; 5.
DR SUPFAM; SSF46565; SSF46565; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS00636; DNAJ_1; 1.
DR PROSITE; PS50076; DNAJ_2; 1.
DR PROSITE; PS50005; TPR; 3.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 1: Evidence at protein level;
KW Chaperone; Endoplasmic reticulum; Reference proteome; Repeat; Signal;
KW TPR repeat.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..476
FT /note="DnaJ protein P58IPK homolog A"
FT /id="PRO_5006056310"
FT REPEAT 36..69
FT /note="TPR 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 70..103
FT /note="TPR 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 116..150
FT /note="TPR 3"
FT /evidence="ECO:0000255"
FT REPEAT 152..184
FT /note="TPR 4"
FT /evidence="ECO:0000255"
FT REPEAT 185..218
FT /note="TPR 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 231..264
FT /note="TPR 6"
FT /evidence="ECO:0000255"
FT REPEAT 269..302
FT /note="TPR 7"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00339"
FT REPEAT 304..336
FT /note="TPR 8"
FT /evidence="ECO:0000255"
FT DOMAIN 357..423
FT /note="J"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00286"
SQ SEQUENCE 476 AA; 53278 MW; B16C9E4CEB6E6E9C CRC64;
MVAMARWPWR VLLPLLLLHS SPVFFVFAQE GQDNDPSTLF KRALEMMNLR KYDGSLGLLN
AVLEVEPNHS EAYRQRASVL RHKCRYKEAE GDYSKYLELK PGSSSVEKEL SQLLQAQNAL
ESAYGQFESH DFSKVLDYIN KIVLVFSPDC LKAKLLKAKA LLALKDYSTV ISETGFILKE
DEDNLDALLL RGRAYYYLAD HDVASRHYQK GLRLDPEHSE LKKAYFGLKN LVKKTKSAED
NAAKGKLRVS AEDYKASLAM DPDHTSYNVH LYLGLCKVLV KLGRGKEAIS SCTEALNIDG
ELVDALTQRG EAKLLTEDWE GAVQDLKEAA QKSPQDMGIR EALMRAEKQL KLSKRKDWYK
ILGISKTASA AEIKRAYKKL ALQWHPDKNV DKREEAENMF REIAAAYEVL GDEDKRVRYD
RGEDLDEMNM GGGGGGGFNP FGGGGQQYTF HYDGGFHGGG GFPGGGFPGG FQFNFG
