DJC43_ORYSJ
ID DJC43_ORYSJ Reviewed; 681 AA.
AC Q7XVN7;
DT 30-NOV-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2004, sequence version 2.
DT 03-AUG-2022, entry version 154.
DE RecName: Full=DnaJ protein ERDJ2 {ECO:0000305};
DE AltName: Full=Chaperone protein dnaJ C43 {ECO:0000305};
DE Short=OsDjC43 {ECO:0000303|PubMed:23160806};
DE AltName: Full=Endoplasmic reticulum dnaJ domain-containing protein 2 {ECO:0000305};
DE Short=OsERdj2 {ECO:0000303|PubMed:24153418};
GN Name=ERDJ2 {ECO:0000303|PubMed:24153418}; Synonyms=DJC43 {ECO:0000305};
GN OrderedLocusNames=Os04g0307200 {ECO:0000312|EMBL:BAF14335.1},
GN LOC_Os04g24180 {ECO:0000305};
GN ORFNames=OsJ_14220 {ECO:0000312|EMBL:EAZ30163.1},
GN OSJNBa0023J03.11 {ECO:0000312|EMBL:CAD40524.2},
GN OSJNBa0024J22.1 {ECO:0000312|EMBL:CAE02397.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=23160806; DOI=10.1007/s12192-012-0384-9;
RA Sarkar N.K., Thapar U., Kundnani P., Panwar P., Grover A.;
RT "Functional relevance of J-protein family of rice (Oryza sativa).";
RL Cell Stress Chaperones 18:321-331(2013).
RN [7]
RP FUNCTION, AND SUBCELLULAR LOCATION.
RX PubMed=24153418; DOI=10.1093/jxb/ert312;
RA Ohta M., Wakasa Y., Takahashi H., Hayashi S., Kudo K., Takaiwa F.;
RT "Analysis of rice ER-resident J-proteins reveals diversity and functional
RT differentiation of the ER-resident Hsp70 system in plants.";
RL J. Exp. Bot. 64:5429-5441(2013).
CC -!- FUNCTION: May be required for integral membrane and secreted preprotein
CC translocation across the endoplasmic reticulum membrane.
CC {ECO:0000305|PubMed:24153418}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000269|PubMed:24153418}; Multi-pass membrane protein
CC {ECO:0000255}.
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DR EMBL; AL731596; CAE02397.1; -; Genomic_DNA.
DR EMBL; AL731597; CAD40524.2; -; Genomic_DNA.
DR EMBL; AP008210; BAF14335.1; -; Genomic_DNA.
DR EMBL; AP014960; BAS88493.1; -; Genomic_DNA.
DR EMBL; CM000141; EAZ30163.1; -; Genomic_DNA.
DR RefSeq; XP_015636461.1; XM_015780975.1.
DR AlphaFoldDB; Q7XVN7; -.
DR STRING; 4530.OS04T0307200-01; -.
DR PaxDb; Q7XVN7; -.
DR PRIDE; Q7XVN7; -.
DR EnsemblPlants; Os04t0307200-01; Os04t0307200-01; Os04g0307200.
DR GeneID; 4335435; -.
DR Gramene; Os04t0307200-01; Os04t0307200-01; Os04g0307200.
DR KEGG; osa:4335435; -.
DR eggNOG; KOG0721; Eukaryota.
DR eggNOG; KOG0951; Eukaryota.
DR HOGENOM; CLU_014210_2_0_1; -.
DR InParanoid; Q7XVN7; -.
DR OMA; RAILHAH; -.
DR OrthoDB; 686427at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000007752; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR ExpressionAtlas; Q7XVN7; baseline and differential.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IDA:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031207; C:Sec62/Sec63 complex; IBA:GO_Central.
DR GO; GO:0008320; F:protein transmembrane transporter activity; IBA:GO_Central.
DR GO; GO:0006620; P:post-translational protein targeting to endoplasmic reticulum membrane; IBA:GO_Central.
DR GO; GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IBA:GO_Central.
DR CDD; cd06257; DnaJ; 1.
DR Gene3D; 1.10.287.110; -; 1.
DR Gene3D; 2.60.40.150; -; 1.
DR InterPro; IPR035892; C2_domain_sf.
DR InterPro; IPR001623; DnaJ_domain.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR036869; J_dom_sf.
DR InterPro; IPR004179; Sec63-dom.
DR Pfam; PF00226; DnaJ; 1.
DR Pfam; PF02889; Sec63; 1.
DR PRINTS; PR00625; JDOMAIN.
DR SMART; SM00271; DnaJ; 1.
DR SMART; SM00973; Sec63; 1.
DR SUPFAM; SSF46565; SSF46565; 1.
DR SUPFAM; SSF81296; SSF81296; 1.
DR PROSITE; PS50076; DNAJ_2; 1.
PE 3: Inferred from homology;
KW Chaperone; Endoplasmic reticulum; Glycoprotein; Membrane;
KW Protein transport; Reference proteome; Transmembrane; Transmembrane helix;
KW Transport.
FT CHAIN 1..681
FT /note="DnaJ protein ERDJ2"
FT /id="PRO_0000438371"
FT TOPO_DOM 1..8
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 9..29
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 30..67
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT TRANSMEM 68..88
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 89..190
FT /note="Lumenal"
FT /evidence="ECO:0000305"
FT TRANSMEM 191..211
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 212..681
FT /note="Cytoplasmic"
FT /evidence="ECO:0000305"
FT DOMAIN 99..164
FT /note="J"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00286"
FT DOMAIN 222..602
FT /note="SEC63"
FT /evidence="ECO:0000255"
FT REGION 613..681
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 625..651
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 7
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00498"
SQ SEQUENCE 681 AA; 76250 MW; D80F31C1BE5D97B3 CRC64;
MAAAEENSSL FLIFILTMIA LPLVPYTIMR LCRAANVKAK TIHCRCSGCH RSGKYRKSIY
KRISNFSTCS NLTILLLWIV MIFLVYYIKH VSREVQVFEP YSILGLEPGA SESDIKKSYR
RLSIQYHPDK NPDPEAHKYF VEFISKAYQA LTDPVSRENY EKYGHPDGRQ GMQMGIALPK
FLLNMDGASG GIMLLGIVGL CILLPLMIAV IYLSRSSKYT GNYVMHQTLS TYYYFMKPSL
APSKVMDVFI KAAEYMEMPV RRSDDEPLQK LFVAVRSELN LDLKNIRTEQ AKFWKQHPSL
VKMELLIQAH LTGESFALTP ALLKDYRHML ELAPRLLDEL VKIALLPRSP HGFGWLRPAI
GVIELSQNII QAVPLSARKA SGGNSEGIAP FLQLPHFTET VVKKIARKKI RSFQEFCDMP
VEERATLLTQ VAGLSDEGAQ DVELVLEMIP SIEVDIKCET EGEEGIQEGD VVTMYAWVSL
HRRNGLTAAL PHAPSFPFHK EENFWLLLAD AASNEVWLSQ KVSFMDETTA ITAASKAIQE
TQEALGASAK EIGIAIREAV DRVKKGSRLV MGKFQAPAEG THNLTSFCLC DAWIGCDTKT
SLKLKVLKRS RAGTRGHVAE EGPVAEDGIE EEEEEEEEEY DDYESEYSDD EEDEKSKGKG
KVANGVAHQK ANSDIDSGSD D
