DLDH_HYMDI
ID DLDH_HYMDI Reviewed; 53 AA.
AC P80647;
DT 13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=Dihydrolipoyl dehydrogenase;
DE EC=1.8.1.4;
DE AltName: Full=Dihydrolipoamide dehydrogenase;
DE Flags: Fragment;
OS Hymenolepis diminuta (Rat tapeworm).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda;
OC Eucestoda; Cyclophyllidea; Hymenolepididae; Hymenolepis.
OX NCBI_TaxID=6216;
RN [1] {ECO:0000305}
RP PROTEIN SEQUENCE, FUNCTION, CATALYTIC ACTIVITY, ACTIVITY REGULATION,
RP BIOPHYSICOCHEMICAL PROPERTIES, SUBUNIT, AND SUBCELLULAR LOCATION.
RC TISSUE=Larva {ECO:0000269|PubMed:9030666};
RX PubMed=9030666; DOI=10.1006/expr.1996.4135;
RA Walker D.J., Burkhart W., Fioravanti C.F.;
RT "Hymenolepis diminuta: mitochondrial NADH --> NAD transhydrogenation and
RT the lipoamide dehydrogenase system.";
RL Exp. Parasitol. 85:158-167(1997).
CC -!- FUNCTION: Lipoamide dehydrogenase is a component of the glycine
CC cleavage system as well as of the alpha-ketoacid dehydrogenase
CC complexes (By similarity). This enzyme has lipoamide dehydrogenase
CC activity and NADH -> NAD transhydrogenation activity. Also displays
CC some NADH-ferricyanide reductase and NADPH -> NAD transydrogenation
CC activities. {ECO:0000250|UniProtKB:P09622, ECO:0000269|PubMed:9030666}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(R)-N(6)-dihydrolipoyl-L-lysyl-[protein] + NAD(+) = (R)-N(6)-
CC lipoyl-L-lysyl-[protein] + H(+) + NADH; Xref=Rhea:RHEA:15045,
CC Rhea:RHEA-COMP:10474, Rhea:RHEA-COMP:10475, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945, ChEBI:CHEBI:83099,
CC ChEBI:CHEBI:83100; EC=1.8.1.4; Evidence={ECO:0000269|PubMed:9030666};
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000250|UniProtKB:P00390};
CC Note=Binds 1 FAD per subunit. {ECO:0000250|UniProtKB:P00390};
CC -!- ACTIVITY REGULATION: Lipoamide reduction and the NADH -> NAD reaction
CC are both completely inhibited by copper and cadmium ions.
CC {ECO:0000269|PubMed:9030666}.
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=0.09 mM for NADH for the NADH -> NAD reaction
CC {ECO:0000269|PubMed:9030666};
CC KM=0.18 mM for NADH for the lipoamide dehydrogenase reaction
CC {ECO:0000269|PubMed:9030666};
CC KM=0.23 mM for AcPyAD for the NADH -> NAD reaction
CC {ECO:0000269|PubMed:9030666};
CC KM=0.51 mM for lipoamide {ECO:0000269|PubMed:9030666};
CC pH dependence:
CC Optimum pH is 7.5 for NADH -> NAD transhydrogenation, 6.5 for
CC lipoamide reduction, 4.5 for NADPH -> NAD transhydrogenation, and 6.5
CC for NADH-ferricyanide reduction. {ECO:0000269|PubMed:9030666};
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:9030666}.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000269|PubMed:9030666}.
CC -!- MISCELLANEOUS: The active site is a redox-active disulfide bond.
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the class-I pyridine nucleotide-disulfide
CC oxidoreductase family. {ECO:0000255}.
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DR AlphaFoldDB; P80647; -.
DR SMR; P80647; -.
DR STRING; 6216.P80647; -.
DR Proteomes; UP000046397; Genome Assembly.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR GO; GO:0004148; F:dihydrolipoyl dehydrogenase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.50.50.60; -; 1.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR012999; Pyr_OxRdtase_I_AS.
DR Pfam; PF07992; Pyr_redox_2; 1.
DR SUPFAM; SSF51905; SSF51905; 1.
DR PROSITE; PS00076; PYRIDINE_REDOX_1; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Disulfide bond; FAD; Flavoprotein;
KW Mitochondrion; NAD; Oxidoreductase; Redox-active center.
FT CHAIN 1..>53
FT /note="Dihydrolipoyl dehydrogenase"
FT /id="PRO_0000311713"
FT BINDING 35..44
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250|UniProtKB:P00390"
FT BINDING 53
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000250"
FT DISULFID 44..49
FT /note="Redox-active"
FT /evidence="ECO:0000250|UniProtKB:P00390"
FT NON_TER 53
FT /evidence="ECO:0000303|PubMed:9030666"
SQ SEQUENCE 53 AA; 5315 MW; D7C11AE8F2F03D94 CRC64;
LSSGEKDLVV IGSGPGGYVA AIKAAQLGML TVCIEKYPTF GGTCLNVGCI PSK