DMRT3_TAKRU
ID DMRT3_TAKRU Reviewed; 468 AA.
AC Q90WM5; Q4AE30;
DT 20-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 20-FEB-2007, sequence version 2.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=Doublesex- and mab-3-related transcription factor 3;
GN Name=dmrt3;
OS Takifugu rubripes (Japanese pufferfish) (Fugu rubripes).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu.
OX NCBI_TaxID=31033;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=11543627; DOI=10.1006/geno.2001.6615;
RA Brunner B., Hornung U., Shan Z., Nanda I., Kondo M., Zend-Ajusch E.,
RA Haaf T., Ropers H.-H., Shima A., Schmid M., Kalscheuer V.M., Schartl M.;
RT "Genomic organization and expression of the doublesex-related gene cluster
RT in vertebrates and detection of putative regulatory regions for DMRT1.";
RL Genomics 77:8-17(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Testis;
RA Yamaguchi A.;
RT "Expression of the DMRT gene and its roles in early gonadal development of
RT the Japanese pufferfish Takifugu rubripes.";
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable transcription factor that plays a role in
CC configuring the spinal circuits controlling motion in vertebrates.
CC Involved in neuronal specification within specific subdivision of
CC spinal cord neurons and in the development of a coordinated locomotor
CC network controlling movements. May regulate transcription (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00070}.
CC -!- SIMILARITY: Belongs to the DMRT family. {ECO:0000305}.
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DR EMBL; AJ295039; CAC42779.1; -; Genomic_DNA.
DR EMBL; AB201463; BAE16954.1; -; mRNA.
DR RefSeq; NP_001033034.1; NM_001037945.1.
DR AlphaFoldDB; Q90WM5; -.
DR SMR; Q90WM5; -.
DR STRING; 31033.ENSTRUP00000040103; -.
DR GeneID; 654277; -.
DR KEGG; tru:654277; -.
DR CTD; 450035; -.
DR eggNOG; KOG3815; Eukaryota.
DR InParanoid; Q90WM5; -.
DR OrthoDB; 897429at2759; -.
DR Proteomes; UP000005226; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR Gene3D; 4.10.1040.10; -; 1.
DR InterPro; IPR001275; DM_DNA-bd.
DR InterPro; IPR036407; DM_DNA-bd_sf.
DR InterPro; IPR005173; DMA.
DR InterPro; IPR026607; DMRT.
DR InterPro; IPR009060; UBA-like_sf.
DR PANTHER; PTHR12322; PTHR12322; 1.
DR Pfam; PF00751; DM; 1.
DR Pfam; PF03474; DMA; 1.
DR SMART; SM00301; DM; 1.
DR SUPFAM; SSF46934; SSF46934; 1.
DR SUPFAM; SSF82927; SSF82927; 1.
DR PROSITE; PS40000; DM_1; 1.
DR PROSITE; PS50809; DM_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc.
FT CHAIN 1..468
FT /note="Doublesex- and mab-3-related transcription factor 3"
FT /id="PRO_0000277796"
FT DOMAIN 234..269
FT /note="DMA"
FT /evidence="ECO:0000255"
FT DNA_BIND 28..75
FT /note="DM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00070"
FT REGION 96..210
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 408..468
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..166
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 177..201
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 15
FT /note="V -> G (in Ref. 2; BAE16954)"
FT /evidence="ECO:0000305"
FT CONFLICT 245
FT /note="P -> S (in Ref. 2; BAE16954)"
FT /evidence="ECO:0000305"
FT CONFLICT 362..363
FT /note="ML -> IV (in Ref. 1; CAC42779)"
FT /evidence="ECO:0000305"
FT CONFLICT 393..394
FT /note="QL -> HV (in Ref. 1; CAC42779)"
FT /evidence="ECO:0000305"
FT CONFLICT 408
FT /note="R -> A (in Ref. 2; BAE16954)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 468 AA; 50953 MW; 2EC9E7188C0727C5 CRC64;
MNGYGSPYLY MGAPVSQPRA PLQRTPKCAR CRNHGVLSWL KGHKRYCRFK DCTCEKCILI
IERQRVMAAQ VALRRQQANE SLESLIPESL RVLPGIGMTA GGEGNQAAPP RTEELELRWS
SPEPQAAPPT CAEATEDTEE VSGGENGGSS SDREQDVSSP EGSKPNSCYT PEPPETPSHP
EEARYSLPKA DNSEKQPKAE SPPRKYPVSP AEQSVLIEGL GGSINLPFSL RANRPPLEVL
KKIFPAHKPP VLELILRGCG GDLVGAIEVL LSSRSADGSA HPHADPHPDT LVVPSNGHLF
EHTLASYHPV SSSAKWSVGS AFRVPETLRF SSDSSAGVVS STPLGVPMQH SPFPQHTRYP
LMLRNSLTRS QASPFVHNDV TLWNTMALQQ QYQLRSAAQY VSPFSPARSG GTVFRSSPIL
SPRPPEEQRV SLQEESCTLG PKPGLYSPEE EYEERSDSAD SRIINASS