ADDA_ENTFA
ID ADDA_ENTFA Reviewed; 1264 AA.
AC Q836J8;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=ATP-dependent helicase/nuclease subunit A {ECO:0000255|HAMAP-Rule:MF_01451};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01451};
DE EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01451};
DE AltName: Full=ATP-dependent helicase/nuclease AddA {ECO:0000255|HAMAP-Rule:MF_01451};
GN Name=addA {ECO:0000255|HAMAP-Rule:MF_01451}; Synonyms=rexA;
GN OrderedLocusNames=EF_1113;
OS Enterococcus faecalis (strain ATCC 700802 / V583).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae;
OC Enterococcus.
OX NCBI_TaxID=226185;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700802 / V583;
RX PubMed=12663927; DOI=10.1126/science.1080613;
RA Paulsen I.T., Banerjei L., Myers G.S.A., Nelson K.E., Seshadri R.,
RA Read T.D., Fouts D.E., Eisen J.A., Gill S.R., Heidelberg J.F., Tettelin H.,
RA Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., Daugherty S.C.,
RA DeBoy R.T., Durkin S.A., Kolonay J.F., Madupu R., Nelson W.C.,
RA Vamathevan J.J., Tran B., Upton J., Hansen T., Shetty J., Khouri H.M.,
RA Utterback T.R., Radune D., Ketchum K.A., Dougherty B.A., Fraser C.M.;
RT "Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus
RT faecalis.";
RL Science 299:2071-2074(2003).
CC -!- FUNCTION: The heterodimer acts as both an ATP-dependent DNA helicase
CC and an ATP-dependent, dual-direction single-stranded exonuclease.
CC Recognizes the chi site generating a DNA molecule suitable for the
CC initiation of homologous recombination. The AddA nuclease domain is
CC required for chi fragment generation; this subunit has the helicase and
CC 3' -> 5' nuclease activities. {ECO:0000255|HAMAP-Rule:MF_01451}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01451};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01451};
CC -!- SUBUNIT: Heterodimer of AddA and AddB/RexB. {ECO:0000255|HAMAP-
CC Rule:MF_01451}.
CC -!- SIMILARITY: Belongs to the helicase family. AddA subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01451}.
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DR EMBL; AE016830; AAO80913.1; -; Genomic_DNA.
DR RefSeq; NP_814843.1; NC_004668.1.
DR RefSeq; WP_002416113.1; NZ_KE136528.1.
DR AlphaFoldDB; Q836J8; -.
DR SMR; Q836J8; -.
DR STRING; 226185.EF_1113; -.
DR DNASU; 1200015; -.
DR EnsemblBacteria; AAO80913; AAO80913; EF_1113.
DR KEGG; efa:EF1113; -.
DR PATRIC; fig|226185.45.peg.2382; -.
DR eggNOG; COG1074; Bacteria.
DR HOGENOM; CLU_001114_3_1_9; -.
DR OMA; KQSIYRW; -.
DR Proteomes; UP000001415; Chromosome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003678; F:DNA helicase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 4.
DR Gene3D; 3.90.320.10; -; 1.
DR HAMAP; MF_01451; AddA; 1.
DR InterPro; IPR014152; DNA_helicase_suAddA.
DR InterPro; IPR014017; DNA_helicase_UvrD-like_C.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011604; PDDEXK-like_dom_sf.
DR InterPro; IPR038726; PDDEXK_AddAB-type.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR014016; UvrD-like_ATP-bd.
DR PANTHER; PTHR11070; PTHR11070; 1.
DR PANTHER; PTHR11070:SF48; PTHR11070:SF48; 1.
DR Pfam; PF12705; PDDEXK_1; 1.
DR Pfam; PF00580; UvrD-helicase; 1.
DR Pfam; PF13361; UvrD_C; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF52980; SSF52980; 1.
DR TIGRFAMs; TIGR02785; addA_Gpos; 1.
DR PROSITE; PS51198; UVRD_HELICASE_ATP_BIND; 1.
DR PROSITE; PS51217; UVRD_HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA damage; DNA repair; DNA-binding; Exonuclease; Helicase;
KW Hydrolase; Nuclease; Nucleotide-binding; Reference proteome.
FT CHAIN 1..1264
FT /note="ATP-dependent helicase/nuclease subunit A"
FT /id="PRO_0000379270"
FT DOMAIN 12..482
FT /note="UvrD-like helicase ATP-binding"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01451"
FT DOMAIN 520..808
FT /note="UvrD-like helicase C-terminal"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01451"
FT BINDING 33..40
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01451"
SQ SEQUENCE 1264 AA; 146451 MW; 6DEA770A76C4F5E7 CRC64;
MSKTIPLRPA NEQFTDSQWQ AVFDGDENIL VSASAGSGKT TVLVRRVIEK VKSGVDIDRL
LIVTYTEAAA REMKERIQVA LQKAMNEEQD PERRRHFSRQ IALLPTANIS TLHAFCLTVI
RRFYYLIDID PVFRMLTDET ETLLLKEDVW DALREQFYAE NQEAFYQLTA NFSNDRSDDG
LTNLIFSFYE FAKANPDPEA WINGLTQAYE VGDQLGESKL FQTYLKPLAV ETLQRTLQRY
EEMVTLTEGE EKLQKIWYLA QNEKEQTKQF LQFLERNDLE SAYNLTELLS FDRYPTVRAE
ELKPTAEQAK QLREQNKKAL NDLKKQLFTL SPDAMKQVLK EATPIVQEMA HVGKQFMEAY
GAEKRLKNLV DFNDLEHYTL AILAKNQADG WHASEASVYY REKFDEVLVD EYQDINQLQE
SILYWLRRPL STEGNLFMVG DVKQSIYSFR LADPTLFIEK YNQYGQGKEG KRIILAENFR
SRKDVLDFTN LVFSQLMDER VGQIAYDESA ALVHGFDQFS EAADYSTELL IYEKKATESV
EFPELQSPEL LIEDKTEGEL YVTALKIREL IDQNFLIYDK KLKTDRPITY QDIVLLTPTK
KNNLTILDVF KSLEIPVQVN DAQNYFQATE IRTMIALLQL IDNPYQDIPL AAVLRSPIVG
LKENELVLIR LANKETSYYE AFLTFNQKME PTMEEAVVQE KTIRFAESLE KWREQARRNQ
ISNLLWTIYR ETAYLDYVGG LPVGKQRQAN LYALVDRAAA YEKTTFRGLF QFVRFIEKMQ
EKDKDLAEPV VLSEENAVRV MTIHASKGLE FPVVFVLDMT KEFNVSDLNE RYIFEENLGV
GIRYLQPEER VMYDTLPFLA IKQVRLRKLL SEEMRKLYVA LTRAEQKLFL VGSYKDQAAM
WKEWLKVGDV ETLVLPAENR LQSKSSLMNW VGMTLVRHQK ADEYQQEVVV SNVPQVKKHP
ANFHIQWFNE EQLRAAIQQL QLPERQAEDL AEKAQLSADK INRGLARLSF NYPFEVATRT
TSYQSVSEIK RVFDDPDNKE IGKIEVREDN TIQAQPLIVN RMIEGDLSKP KFLDTVQAPS
AAEIGTATHY LLQLIDLSKQ PSYEEVRAVQ ERLVENKLIL PAIAEKMNLE QIVAFFDTAL
GKQLIQHHQT VRREQPFSML IEAEELIQNY PETTQDDLLI HGIIDGYIEL DNQCILYDYK
TDHVKGTSPQ AISEIVERYR GQMNLYRRAL QEATHKEVSH VYLILLNGGV IIDMQTGNVV
DFIK