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DNABP_ALIF1
ID   DNABP_ALIF1             Reviewed;          80 AA.
AC   Q5E7H1;
DT   14-OCT-2015, integrated into UniProtKB/Swiss-Prot.
DT   15-MAR-2005, sequence version 1.
DT   25-MAY-2022, entry version 77.
DE   RecName: Full=DNA-binding protein VF_0530 {ECO:0000303|PubMed:21905121};
GN   OrderedLocusNames=VF_0530 {ECO:0000312|EMBL:AAW85025.1};
OS   Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
OX   NCBI_TaxID=312309;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700601 / ES114 {ECO:0000312|Proteomes:UP000000537};
RX   PubMed=15703294; DOI=10.1073/pnas.0409900102;
RA   Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R.,
RA   Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E.,
RA   Stevens A., Visick K., Whistler C., Greenberg E.P.;
RT   "Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with
RT   pathogenic congeners.";
RL   Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005).
RN   [2] {ECO:0007744|PDB:2JVW}
RP   STRUCTURE BY NMR, FUNCTION, AND SUBUNIT.
RX   PubMed=21905121; DOI=10.1002/prot.23121;
RA   Aramini J.M., Rossi P., Fischer M., Xiao R., Acton T.B., Montelione G.T.;
RT   "Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic
RT   acid-binding function.";
RL   Proteins 79:2988-2991(2011).
CC   -!- FUNCTION: Binds double-stranded DNA (dsDNA).
CC       {ECO:0000269|PubMed:21905121}.
CC   -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:21905121}.
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DR   EMBL; CP000020; AAW85025.1; -; Genomic_DNA.
DR   RefSeq; YP_203913.1; NC_006840.2.
DR   PDB; 2JVW; NMR; -; A=1-80.
DR   PDBsum; 2JVW; -.
DR   AlphaFoldDB; Q5E7H1; -.
DR   BMRB; Q5E7H1; -.
DR   SMR; Q5E7H1; -.
DR   STRING; 312309.VF_0530; -.
DR   EnsemblBacteria; AAW85025; AAW85025; VF_0530.
DR   KEGG; vfi:VF_0530; -.
DR   PATRIC; fig|312309.11.peg.521; -.
DR   eggNOG; COG4628; Bacteria.
DR   HOGENOM; CLU_151208_2_0_6; -.
DR   OMA; VNINCFK; -.
DR   OrthoDB; 1457473at2; -.
DR   EvolutionaryTrace; Q5E7H1; -.
DR   Proteomes; UP000000537; Chromosome I.
DR   GO; GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB.
DR   Gene3D; 1.10.720.30; -; 1.
DR   InterPro; IPR018668; DNA-binding_VF530-like.
DR   InterPro; IPR036361; SAP_dom_sf.
DR   Pfam; PF09905; VF530; 1.
PE   1: Evidence at protein level;
KW   3D-structure; DNA-binding; Reference proteome.
FT   CHAIN           1..80
FT                   /note="DNA-binding protein VF_0530"
FT                   /id="PRO_0000433962"
FT   HELIX           17..27
FT                   /evidence="ECO:0007829|PDB:2JVW"
FT   HELIX           30..36
FT                   /evidence="ECO:0007829|PDB:2JVW"
FT   STRAND          39..41
FT                   /evidence="ECO:0007829|PDB:2JVW"
FT   HELIX           48..57
FT                   /evidence="ECO:0007829|PDB:2JVW"
FT   HELIX           59..73
FT                   /evidence="ECO:0007829|PDB:2JVW"
SQ   SEQUENCE   80 AA;  9659 MW;  3DDA1033B5E19BEC CRC64;
     MALIMTQQNN PLHGITLQKL LTELVEHYGW EELSYMVNIN CFKKDPSIKS SLKFLRKTDW
     ARERVENIYL KLQRHKERNQ
 
 
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