DNAJ6_ARATH
ID DNAJ6_ARATH Reviewed; 284 AA.
AC Q9FL54; O49070;
DT 10-MAY-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Chaperone protein dnaJ 6;
DE Short=AtDjC6;
DE Short=AtJ6;
GN Name=ATJ6; Synonyms=C6, J6; OrderedLocusNames=At5g06910; ORFNames=MOJ9.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RA Krocynska B., Coop N.E., Miernyk J.A.;
RT "AtJ6, a unique J-domain protein from Arabidopsis thaliana.";
RL Plant Sci. 151:19-27(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9679202; DOI=10.1093/dnares/5.2.131;
RA Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence
RT features of the regions of 1,381,565 bp covered by twenty one physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:131-145(1998).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11599562; DOI=10.1379/1466-1268(2001)006<0209:tjdpoa>2.0.co;2;
RA Miernyk J.A.;
RT "The J-domain proteins of Arabidopsis thaliana: an unexpectedly large and
RT diverse family of chaperones.";
RL Cell Stress Chaperones 6:209-218(2001).
CC -!- FUNCTION: Plays a continuous role in plant development probably in the
CC structural organization of compartments. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Highly expressed in leaves, flowers and siliques,
CC and to lower extent in roots. {ECO:0000269|Ref.1}.
CC -!- SIMILARITY: Belongs to the DnaJ family. C/III subfamily. {ECO:0000305}.
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DR EMBL; AF037168; AAB91418.1; -; mRNA.
DR EMBL; AB010697; BAB11149.1; -; Genomic_DNA.
DR EMBL; CP002688; AED91081.1; -; Genomic_DNA.
DR EMBL; BT006202; AAP12851.1; -; mRNA.
DR RefSeq; NP_196308.1; NM_120773.4.
DR AlphaFoldDB; Q9FL54; -.
DR SMR; Q9FL54; -.
DR BioGRID; 15861; 1.
DR STRING; 3702.AT5G06910.1; -.
DR iPTMnet; Q9FL54; -.
DR PaxDb; Q9FL54; -.
DR PRIDE; Q9FL54; -.
DR ProteomicsDB; 221871; -.
DR EnsemblPlants; AT5G06910.1; AT5G06910.1; AT5G06910.
DR GeneID; 830582; -.
DR Gramene; AT5G06910.1; AT5G06910.1; AT5G06910.
DR KEGG; ath:AT5G06910; -.
DR Araport; AT5G06910; -.
DR TAIR; locus:2169449; AT5G06910.
DR eggNOG; KOG0719; Eukaryota.
DR HOGENOM; CLU_055868_2_1_1; -.
DR InParanoid; Q9FL54; -.
DR OMA; FYNKFNG; -.
DR OrthoDB; 1416483at2759; -.
DR PhylomeDB; Q9FL54; -.
DR PRO; PR:Q9FL54; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FL54; baseline and differential.
DR Genevisible; Q9FL54; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd06257; DnaJ; 1.
DR Gene3D; 1.10.287.110; -; 1.
DR InterPro; IPR042977; AtJ6-like.
DR InterPro; IPR001623; DnaJ_domain.
DR InterPro; IPR036869; J_dom_sf.
DR PANTHER; PTHR44916; PTHR44916; 1.
DR Pfam; PF00226; DnaJ; 1.
DR PRINTS; PR00625; JDOMAIN.
DR SMART; SM00271; DnaJ; 1.
DR SUPFAM; SSF46565; SSF46565; 1.
DR PROSITE; PS50076; DNAJ_2; 1.
PE 2: Evidence at transcript level;
KW Chaperone; Nucleus; Reference proteome.
FT CHAIN 1..284
FT /note="Chaperone protein dnaJ 6"
FT /id="PRO_0000071080"
FT DOMAIN 29..94
FT /note="J"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00286"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 196..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 252..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 3..6
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT MOTIF 209..215
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 121
FT /note="N -> T (in Ref. 1; AAB91418)"
FT /evidence="ECO:0000305"
FT CONFLICT 131
FT /note="N -> T (in Ref. 1; AAB91418)"
FT /evidence="ECO:0000305"
FT CONFLICT 218
FT /note="A -> P (in Ref. 1; AAB91418)"
FT /evidence="ECO:0000305"
FT CONFLICT 267
FT /note="A -> S (in Ref. 1; AAB91418)"
FT /evidence="ECO:0000305"
FT CONFLICT 273..274
FT /note="SK -> TQ (in Ref. 1; AAB91418)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 284 AA; 32574 MW; 5F5A4D3CA04C7733 CRC64;
MGRKKKSRAS TTEEDEIEMD NAGPSSETSL YEVLGVERRA TSQEIRKAYH KLALKLHPDK
NQDDKEAKDK FQQLQKVISI LGDEEKRAVY DQTGSIDDAD IPGDAFENLR DFFRDMYKKV
NEADIEEFEA NYRGSESEKK DLLELFNKFK GKMNRLFCSM LCSDPKLDSH RFKDMLDEAI
AAGEVKSSKA YEKWANKISE TKPPTSPLRK RKKKKSAAKD SETDLCLMIA KRQEERKGKV
DSMFSSLISR YGGDAEAEPT EEEFEAAQRR IESKRKPSKK SRGK
