ADDB_LACH4
ID ADDB_LACH4 Reviewed; 1160 AA.
AC A8YVK1;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 15-JAN-2008, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01453};
DE AltName: Full=ATP-dependent helicase/nuclease RexB {ECO:0000255|HAMAP-Rule:MF_01453};
GN Name=rexB {ECO:0000255|HAMAP-Rule:MF_01453}; OrderedLocusNames=lhv_1274;
OS Lactobacillus helveticus (strain DPC 4571).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=405566;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DPC 4571;
RX PubMed=17993529; DOI=10.1128/jb.01295-07;
RA Callanan M., Kaleta P., O'Callaghan J., O'Sullivan O., Jordan K.,
RA McAuliffe O., Sangrador-Vegas A., Slattery L., Fitzgerald G.F.,
RA Beresford T., Ross R.P.;
RT "Genome sequence of Lactobacillus helveticus: an organism distinguished by
RT selective gene loss and IS element expansion.";
RL J. Bacteriol. 190:727-735(2008).
CC -!- FUNCTION: The heterodimer acts as both an ATP-dependent DNA helicase
CC and an ATP-dependent, dual-direction single-stranded exonuclease.
CC Recognizes the chi site generating a DNA molecule suitable for the
CC initiation of homologous recombination. This subunit has 5' -> 3'
CC nuclease activity. {ECO:0000255|HAMAP-Rule:MF_01453}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- SUBUNIT: Heterodimer of AddA and RexB. {ECO:0000255|HAMAP-
CC Rule:MF_01453}.
CC -!- SIMILARITY: Belongs to the helicase family. AddB/RexB type 2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01453}.
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DR EMBL; CP000517; ABX27288.1; -; Genomic_DNA.
DR RefSeq; WP_012211954.1; NC_010080.1.
DR AlphaFoldDB; A8YVK1; -.
DR SMR; A8YVK1; -.
DR STRING; 405566.lhv_1274; -.
DR EnsemblBacteria; ABX27288; ABX27288; lhv_1274.
DR KEGG; lhe:lhv_1274; -.
DR eggNOG; COG3857; Bacteria.
DR HOGENOM; CLU_007838_0_0_9; -.
DR OMA; DRLENYV; -.
DR Proteomes; UP000000790; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003678; F:DNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 3.
DR HAMAP; MF_01453; AddB_type2; 1.
DR InterPro; IPR014141; DNA_helicase_suRexB.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038726; PDDEXK_AddAB-type.
DR PANTHER; PTHR11070; PTHR11070; 1.
DR Pfam; PF12705; PDDEXK_1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA damage; DNA repair; Exonuclease; Hydrolase; Nuclease;
KW Nucleotide-binding.
FT CHAIN 1..1160
FT /note="ATP-dependent helicase/deoxyribonuclease subunit B"
FT /id="PRO_0000379373"
SQ SEQUENCE 1160 AA; 134065 MW; EBF73F2424E3BD1E CRC64;
MIKIITGRQT DPLQEKILAT AIENYQQHPE NETFIIVPNH IKFTTEVRAI NKLASSKKQT
ETAVKNLHVL SFSRLAWFFL KDAEQGLPTQ LDDAASAMLL THIIEQKQDE LIIFEQSNSG
MVRQLYNTIL QVYDGNLDLD NIDETNLDQE TKSKIHDLRI IYDAFIEEIA GKFSTKNEVQ
VQLNDILAKN SELKNASFYF CDFSHFSLQE MLTIQILMRK AKNVTLAFKT RLGNINPKAE
AGDYDYVIQQ TIRRLVSFLQ ERDMDYVASE FPIPSEPTPR EILNSLWTET VSKVDELKQV
QLVKADSRYA EAYFVARTIY QQVALNNYRY RDFLILAPDL KEYETYLTPI LRQNNIPFFN
DLQQEMKYHP LVVLIENLFN LRDLKENPFQ TQSMLAILKT HLLIPSWYKE EAEYIHDVDE
LENFVLAHGI NHNLWKKHFA DFVSAEVIRL DKIDEEVAKI DRLRGYLVDK VTNLFTKLEQ
EKDSQKALTI FFDFLTKNGI AERLEQWRDA ANNAGDLQQA QQPEQLWDLL IQLLKDYLAI
NPEKFDLDEF FNMLISAFKE ATFSQIPSTL DAVNLSEMGM VQTSGYKQVF IIGATSGNLP
SIEKKPGFLT TENLNQLQSS FESDAYLEDN QRLNNLDQNY QFGLSLALAQ DRVYISYPVL
NASNEKLDPS IYYQRLQDYG APEFSQHDLP EKMQELLSFI TNPDASLGYL AYINSNTSDE
AIDELLKITQ KYLPQKVKAV LDASDFDNQP EDIGEDLAAE LYGKNLYSSV SQLETFYENS
YEYFLTYGLK LRRRLENEFD VIQAGNYFHE TFDRLVKRLN EQHIDLADLS SVELEQQLNQ
VRDVIKDESK YAQLMNDPFN QYLFHCLDHT TSKVAQNWRK SLAETPLRAK YSELSFGLDQ
KIKGISLDIP DLPGNHQVNL RGKIDRVDLA NFAEKDQVLA QVIDYKSSAK KFDLGMFYNG
IALQMISYLD VLTNNNRFFA EEDKLSLLGA FYQTVTRQLE RLNSNKLIDS SLNLRENAID
SKPKLMYTGL ISNNPEILLE AEPLLDGKSS QASQLYTGVG TKARGGFKLP ADRNFSEEEF
QLLLEYDEYL IKEASRQILS GQIKLNPYRY GRSKNALTYS DFKDIFFFDA MLRHNQYHEI
SNMSKKDLLV KIKEKLGKKD