ADDB_LATSS
ID ADDB_LATSS Reviewed; 1186 AA.
AC Q38X70;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 22-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 88.
DE RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01453};
DE AltName: Full=ATP-dependent helicase/nuclease RexB {ECO:0000255|HAMAP-Rule:MF_01453};
GN Name=rexB {ECO:0000255|HAMAP-Rule:MF_01453}; OrderedLocusNames=LCA_0909;
OS Latilactobacillus sakei subsp. sakei (strain 23K) (Lactobacillus sakei
OS subsp. sakei).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC Latilactobacillus.
OX NCBI_TaxID=314315;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=23K;
RX PubMed=16273110; DOI=10.1038/nbt1160;
RA Chaillou S., Champomier-Verges M.-C., Cornet M., Crutz-Le Coq A.-M.,
RA Dudez A.-M., Martin V., Beaufils S., Darbon-Rongere E., Bossy R., Loux V.,
RA Zagorec M.;
RT "The complete genome sequence of the meat-borne lactic acid bacterium
RT Lactobacillus sakei 23K.";
RL Nat. Biotechnol. 23:1527-1533(2005).
CC -!- FUNCTION: The heterodimer acts as both an ATP-dependent DNA helicase
CC and an ATP-dependent, dual-direction single-stranded exonuclease.
CC Recognizes the chi site generating a DNA molecule suitable for the
CC initiation of homologous recombination. This subunit has 5' -> 3'
CC nuclease activity. {ECO:0000255|HAMAP-Rule:MF_01453}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- SUBUNIT: Heterodimer of AddA and RexB. {ECO:0000255|HAMAP-
CC Rule:MF_01453}.
CC -!- SIMILARITY: Belongs to the helicase family. AddB/RexB type 2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01453}.
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DR EMBL; CR936503; CAI55211.1; -; Genomic_DNA.
DR RefSeq; WP_011374611.1; NC_007576.1.
DR AlphaFoldDB; Q38X70; -.
DR SMR; Q38X70; -.
DR STRING; 314315.LCA_0909; -.
DR EnsemblBacteria; CAI55211; CAI55211; LCA_0909.
DR KEGG; lsa:LCA_0909; -.
DR eggNOG; COG3857; Bacteria.
DR HOGENOM; CLU_007838_0_0_9; -.
DR OMA; DRLENYV; -.
DR OrthoDB; 1283891at2; -.
DR BioCyc; LSAK314315:LCA_RS04565-MON; -.
DR Proteomes; UP000002707; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003678; F:DNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 3.
DR Gene3D; 3.90.320.10; -; 1.
DR HAMAP; MF_01453; AddB_type2; 1.
DR InterPro; IPR014141; DNA_helicase_suRexB.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011604; PDDEXK-like_dom_sf.
DR InterPro; IPR038726; PDDEXK_AddAB-type.
DR PANTHER; PTHR11070; PTHR11070; 1.
DR Pfam; PF12705; PDDEXK_1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA damage; DNA repair; Exonuclease; Hydrolase; Nuclease;
KW Nucleotide-binding; Reference proteome.
FT CHAIN 1..1186
FT /note="ATP-dependent helicase/deoxyribonuclease subunit B"
FT /id="PRO_0000379378"
SQ SEQUENCE 1186 AA; 136081 MW; F288A117B8D45D55 CRC64;
MSLKFILGTA SYDHHQALVT NLKATFQEKP QERYFYLVPN HIKFESEVSI LEALKSDEND
YVAASQIQVF SLTRLAWYFM KNTPYYQIPR ISTAGLNMLV FRLLQEHQEQ LQLFRGEVRH
TGFVAQLTKQ LLELKIGCIT PADLTAMAEN LGDQQVELAK KLHDLTIIAT AFEAAMQKRF
IENTALIDAL TLFLQQQTLT DCHFYVEGFA QFTAQEQALL TTLMQQSEVQ IGFILDRAYP
NQQPDGLNFF FQAGRTYYNL YQQARLNHVP VMMDQMADSQ RLTPALAALD QFWVSSESPG
NRKLSPVPVA DHLHVVAAEN RYAELRYVAR EIRRLVQTGH YRYRDFLILT RHLAPYQTMI
APILTEYEIP YFCDLPQTMA AHPLVSLLEK LLDVNLHFYR YEDVMALLKT ELLIPKGMSI
AEFRADLDLC ENLILKNGYE GKDWLNDFDW QFYRFGSYQE GTRTTQDEAL TERINGIRRY
VQATLPPFYR ALKAAKTGRQ VVQVLYQFLI DHGVDRQLLH WRDQALAANQ VAQAGQPEQT
WSTFMQMLDE YVTLLGDVSF EEDNTEQLNE FKQLLSAGFA AAQYAQIPST LDQVVLSESG
MVQTKKRQIT FMIGSTDQVM PDQIENTALL TDQDRQRLLD NEGQVTPLLN ESSVGKMNAE
PYLNYLAFLS SQTTVYFTYP LGNGEGTAFK ISPYVERIRN HFDLTIQKIA AEQSLQSTET
PQGSWRSLLS DLIQVSRQAQ ENQTLIPEQW LTTYRLLQQA PQSQFLTTQL FQSLNYRNEP
ERLTPEIVTG LYGNEIHTSI SKLEEFYQNQ YAYFLKYGLK LQERPVFELT PANTGNFYHE
VMDRFIKLIQ GQQIALPELD DQQIDKLVSE VLAKTYEQPE FKILNKTARM GYIRQQLMQT
VKRVSLALRN QSLSTNLRPL ATEVLFGQVG AEKGLQGLNF MLDDHREVKV RGKIDRIDQL
TINNQPYLGI VDYKSSQHSF NFRDAYYGLA LQMLTYLETV LQDQQAILPA NSAVKPAGAF
YLHLKNPTLT LKQLTKKKMG QLQKGEFDQM LLDQFKYNGL IVNDEELLEN LDTTLVNGQS
PLFAFSKLKS GKFSSKQLVT LNQLDLLMAH NEDLIKEAGQ AIFAGDTALN PIMRPDRTNA
LTLSPFKSIF QFDAMLPENN YRQLEALDEK AVLERLMSKK GDGNLE