ADDB_LEUCK
ID ADDB_LEUCK Reviewed; 1171 AA.
AC B1MZM3;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 73.
DE RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01453};
DE AltName: Full=ATP-dependent helicase/nuclease RexB {ECO:0000255|HAMAP-Rule:MF_01453};
GN Name=rexB {ECO:0000255|HAMAP-Rule:MF_01453}; OrderedLocusNames=LCK_01148;
OS Leuconostoc citreum (strain KM20).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC Leuconostoc.
OX NCBI_TaxID=349519;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KM20;
RX PubMed=18281406; DOI=10.1128/jb.01862-07;
RA Kim J.F., Jeong H., Lee J.-S., Choi S.-H., Ha M., Hur C.-G., Kim J.-S.,
RA Lee S., Park H.-S., Park Y.-H., Oh T.K.;
RT "Complete genome sequence of Leuconostoc citreum KM20.";
RL J. Bacteriol. 190:3093-3094(2008).
CC -!- FUNCTION: The heterodimer acts as both an ATP-dependent DNA helicase
CC and an ATP-dependent, dual-direction single-stranded exonuclease.
CC Recognizes the chi site generating a DNA molecule suitable for the
CC initiation of homologous recombination. This subunit has 5' -> 3'
CC nuclease activity. {ECO:0000255|HAMAP-Rule:MF_01453}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- SUBUNIT: Heterodimer of AddA and RexB. {ECO:0000255|HAMAP-
CC Rule:MF_01453}.
CC -!- SIMILARITY: Belongs to the helicase family. AddB/RexB type 2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01453}.
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DR EMBL; DQ489736; ACA82975.1; -; Genomic_DNA.
DR RefSeq; WP_004908913.1; NC_010471.1.
DR AlphaFoldDB; B1MZM3; -.
DR SMR; B1MZM3; -.
DR STRING; 349519.LCK_01148; -.
DR EnsemblBacteria; ACA82975; ACA82975; LCK_01148.
DR KEGG; lci:LCK_01148; -.
DR eggNOG; COG3857; Bacteria.
DR HOGENOM; CLU_007838_0_0_9; -.
DR OMA; DRLENYV; -.
DR OrthoDB; 1283891at2; -.
DR Proteomes; UP000002166; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003678; F:DNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 4.
DR Gene3D; 3.90.320.10; -; 1.
DR HAMAP; MF_01453; AddB_type2; 1.
DR InterPro; IPR014141; DNA_helicase_suRexB.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR011604; PDDEXK-like_dom_sf.
DR InterPro; IPR038726; PDDEXK_AddAB-type.
DR PANTHER; PTHR11070; PTHR11070; 1.
DR Pfam; PF12705; PDDEXK_1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA damage; DNA repair; Exonuclease; Hydrolase; Nuclease;
KW Nucleotide-binding.
FT CHAIN 1..1171
FT /note="ATP-dependent helicase/deoxyribonuclease subunit B"
FT /id="PRO_0000379383"
SQ SEQUENCE 1171 AA; 132448 MW; 5568E84954912EDA CRC64;
MSLTVYMNHG QIDMRHALLS HAHEALNQDN NLTVYYIVPN HVKFDSEVDV LRRFARLTGQ
NPDTSLYAQS RLQVYSLSRL TWALLKDMAT MQPNVIQGTG LFIMVSDILR DYAAQLPIFA
RMQSKAGFVT TLVAQLVELR ASRISPEDLL TILNQESDDD TFLRQTLSGK LRDLAIVADA
LDKKMGHTYI TQQEVLSFFA TQLATTQLKN VAFYFDGFNG FTSPETQVMI ELMARYPVTV
ALLGDVEKLG SQQPGDLFYK PMTTAQRLAQ FTKIANQQVV WQVPTQARCL DESIISVMSA
WEKLGEYRQF NSENKKTNLA AFVAENTMVE IQEVARRIRQ LLVAQPDLRL RDILILARDL
TPYTGHIPEV MQQFDLPYFL DTDQKMTNHP LVELLLNLLR PAKERFQYQQ VMAILKTGLL
RPYTDGSLVP EGDFFDIVSY LDNYLYANQP FERTWRDLDH PFTLFTVSED EDDEDARVVL
DDKTVNRRIE TLRRFVIDAF DSLQQQLNQA QTMRQAATLI ILWLEKYHVT EAILSQRDTL
LAAGELSRSR EGEEVWEMMT QTLDDIVAID GDERFELEKF KAILVAGFEG ATFSGIPNNL
DQLTISEAGI VQSNDYQYLF FIGGTRNNLP AQLKSRALIN DAERLIVQPA LQENSTPKYL
QNTAQQQMAE ENLLFYGALT AATKNIVLSY PALDAGGQIS DMSPFFKRLV DAFNITVNKV
TATPATSQAL LKYYVGSVRS TLGELVKIAA SQQQTSAYQA LRNTINQSEP ERLERVLSAP
NYKNQTETLK PELVQALFGE TLNMSISQLE SYYNNPLAYF LQYGLALKER LTNRLNVAQT
GTLYHAVFEG VVQQLIIQQL SLRDISQKAL QQLVADNMAE ITAQPAYQML QETGKMRATQ
HYLAKVSEIL AVNMQRAARV NHAQPKAVER LFGFPNRQSL PALVVSTPQA TVHLRGKIDR
LDSQDPSQVY GTIIDYKSNG KHFDWGQAYD GRQMQLLTYW QAAQLSAEQL GIEAIGGAFF
AKIAPEKLTI KDFKGDVRAM LRGEIKPEQF KYRGLFISEP AYIDSLETLA EGEGSQFYQL
KKKANGELYA NSDVISPEDF ELLLKRNLDN IQRASAAILS GDFPLSPAEG SLQFTPFTDV
LRFDRALGDQ YKNNTPKNKS DILKLLKADE E