ADDB_LIGS1
ID ADDB_LIGS1 Reviewed; 1193 AA.
AC Q1WRR9;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 1.
DT 25-MAY-2022, entry version 83.
DE RecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01453};
DE EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_01453};
DE AltName: Full=ATP-dependent helicase/nuclease RexB {ECO:0000255|HAMAP-Rule:MF_01453};
GN Name=rexB {ECO:0000255|HAMAP-Rule:MF_01453}; OrderedLocusNames=LSL_1608;
OS Ligilactobacillus salivarius (strain UCC118) (Lactobacillus salivarius).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC Ligilactobacillus.
OX NCBI_TaxID=362948;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCC118;
RX PubMed=16617113; DOI=10.1073/pnas.0511060103;
RA Claesson M.J., Li Y., Leahy S., Canchaya C., van Pijkeren J.P.,
RA Cerdeno-Tarraga A.M., Parkhill J., Flynn S., O'Sullivan G.C., Collins J.K.,
RA Higgins D., Shanahan F., Fitzgerald G.F., van Sinderen D., O'Toole P.W.;
RT "Multireplicon genome architecture of Lactobacillus salivarius.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:6718-6723(2006).
CC -!- FUNCTION: The heterodimer acts as both an ATP-dependent DNA helicase
CC and an ATP-dependent, dual-direction single-stranded exonuclease.
CC Recognizes the chi site generating a DNA molecule suitable for the
CC initiation of homologous recombination. This subunit has 5' -> 3'
CC nuclease activity. {ECO:0000255|HAMAP-Rule:MF_01453}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01453};
CC -!- SUBUNIT: Heterodimer of AddA and RexB. {ECO:0000255|HAMAP-
CC Rule:MF_01453}.
CC -!- SIMILARITY: Belongs to the helicase family. AddB/RexB type 2 subfamily.
CC {ECO:0000255|HAMAP-Rule:MF_01453}.
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DR EMBL; CP000233; ABE00410.1; -; Genomic_DNA.
DR RefSeq; WP_011476467.1; NC_007929.1.
DR RefSeq; YP_536493.1; NC_007929.1.
DR AlphaFoldDB; Q1WRR9; -.
DR SMR; Q1WRR9; -.
DR STRING; 362948.LSL_1608; -.
DR EnsemblBacteria; ABE00410; ABE00410; LSL_1608.
DR KEGG; lsl:LSL_1608; -.
DR PATRIC; fig|362948.14.peg.1703; -.
DR HOGENOM; CLU_007838_0_0_9; -.
DR OMA; DRLENYV; -.
DR Proteomes; UP000006559; Chromosome.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA.
DR GO; GO:0003678; F:DNA helicase activity; IEA:UniProtKB-EC.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.300; -; 3.
DR HAMAP; MF_01453; AddB_type2; 1.
DR InterPro; IPR014141; DNA_helicase_suRexB.
DR InterPro; IPR000212; DNA_helicase_UvrD/REP.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038726; PDDEXK_AddAB-type.
DR PANTHER; PTHR11070; PTHR11070; 1.
DR Pfam; PF12705; PDDEXK_1; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; DNA damage; DNA repair; Exonuclease; Hydrolase; Nuclease;
KW Nucleotide-binding; Reference proteome.
FT CHAIN 1..1193
FT /note="ATP-dependent helicase/deoxyribonuclease subunit B"
FT /id="PRO_0000379379"
SQ SEQUENCE 1193 AA; 138141 MW; 639596BE76DD7C2E CRC64;
MSLGFVLGDA TKNHRQVLLE QITNWQAEDP QAKIYYIVPN HNKFSAEVKV LDYLKSQQDN
QDLFATSNVQ TFSFTRLAWY FMKDTATYQV NRITNAGLNM IVYRSLQEHS DELTIFKGEQ
TQPGFIAQLV SQLIELQQSC ITYDDIERMK ENLSQQDTAD SAELEAKLHD IAIIYRDFMQ
MTDSKYLKPA DILPSLTQYL QNEDLSNSYF IIEGFSQFTA QEQAIISVLL QRAKEVRIDL
ILNRGVTDIE DLSDKQSLFY RSERTYYLLY QQARKAQVKI LNDVYPQELR VETPELQSLA
KYWKESTDLK PINVEKIGDN HNLQVIKADT RMTEIKEIAT RIKQMVALKD YRYADFLLLT
PDLNKYRNII EPIFNDYKVP IFVDLAKKMI DHPLVELLTA LFNVKARHYR YVDMMRLLKT
ELLIPKTEYG YLGIKQFRQD LDLTENLILK FGFEGSQWLR KDDWVYYRFG SSDFGTQTDV
QEKITKQVNV IRRYIKEILP PFFKQLDEAE NGKEAAQILM NFLIINGVPE QLINWRNKAL
EQGDMVMADR PEQVWNLFCA LMDEYVDTLG DLSFKEEDFL NLLQTGFEGA TYRQVPSTLD
QVIISETTAT QMNDRKVTFI FGATDLVMPN RIQNTMLLTD MDRELVQGTL DDEKYLSDTA
EGRMAAEPFM NYLAFMTPKE RLYFSYPVAG VNEDGLRMSP YVNRIMKQFD LPLYEANGEP
TLEDKKVLKF VATKRTALSN LIGVARQAKG QKQPLPVMWR YIYQKLQEDA TYRRLTRKLM
AGIEYSNIPE RLKTEYAEKL YGKTLNTSVS KFEEFFKNHY AFFLKYGLKL KERDVFELSP
ANTGEFYHMA LDKLLKTLKQ DKVSITDINK SQFDAYLQQV LGGMEQLPQF QILQSSNRMQ
FILKQLGATV SQMGWALHNQ GQRTKMRPLE TEVLFGHVGT ENGLKALTYD LGNGHKVNVR
GKIDRIDQMI IDNQRYLGIV DYKSSSHKFN YQDAYYGLAL QMLTYLNAML QNTDLLLDLN
AGEEIKPAGA VYMHLQNPVI KQKDILKNPY SEVLLKQNKY DGLVLDDQEL LSNLDTSIEK
AGNSIVYPVR KYADGHFGGI KNSGNVITFD NLMLLLKRNE ELIQEAAKLI FAGDVALNPV
LWPDRRSALQ YSPYKAIMQF DELLGNQYYR LPKENTADIL QKLAQENSAE SEV