DNBI_EBVA8
ID DNBI_EBVA8 Reviewed; 1128 AA.
AC Q1HVB8;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2006, sequence version 1.
DT 23-FEB-2022, entry version 51.
DE RecName: Full=Major DNA-binding protein {ECO:0000255|HAMAP-Rule:MF_04007};
GN Name=DBP {ECO:0000255|HAMAP-Rule:MF_04007}; ORFNames=BALF2;
OS Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.
OX NCBI_TaxID=82830;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16490228; DOI=10.1016/j.virol.2006.01.015;
RA Dolan A., Addison C., Gatherer D., Davison A.J., McGeoch D.J.;
RT "The genome of Epstein-Barr virus type 2 strain AG876.";
RL Virology 350:164-170(2006).
CC -!- FUNCTION: Plays several crucial roles in viral infection. Participates
CC in the opening of the viral DNA origin to initiate replication by
CC interacting with the origin-binding protein. May disrupt loops,
CC hairpins and other secondary structures present on ssDNA to reduce and
CC eliminate pausing of viral DNA polymerase at specific sites during
CC elongation. Promotes viral DNA recombination by performing strand-
CC transfer, characterized by the ability to transfer a DNA strand from a
CC linear duplex to a complementary single-stranded DNA circle. Can also
CC catalyze the renaturation of complementary single strands.
CC Additionally, reorganizes the host cell nucleus, leading to the
CC formation of prereplicative sites and replication compartments. This
CC process is driven by the protein which can form double-helical
CC filaments in the absence of DNA. {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SUBUNIT: Homooligomers. Forms double-helical filaments necessary for
CC the formation of replication compartments within the host nucleus.
CC Interacts with the origin-binding protein. Interacts with the helicase
CC primase complex; this interaction stimulates primer synthesis activity
CC of the helicase-primase complex. Interacts with the DNA polymerase.
CC Interacts with the alkaline exonuclease; this interaction increases its
CC nuclease processivity. {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SUBCELLULAR LOCATION: Virion tegument {ECO:0000250|UniProtKB:Q8WUF5}.
CC Host nucleus {ECO:0000255|HAMAP-Rule:MF_04007}. Note=In the absence of
CC DNA replication, found in the nuclear framework-associated structures
CC (prereplicative sites). As viral DNA replication proceeds, it migrates
CC to globular intranuclear structures (replication compartments).
CC {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SIMILARITY: Belongs to the herpesviridae major DNA-binding protein
CC family. {ECO:0000255|HAMAP-Rule:MF_04007}.
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DR EMBL; DQ279927; ABB89289.1; -; Genomic_DNA.
DR RefSeq; YP_001129510.1; NC_009334.1.
DR SMR; Q1HVB8; -.
DR PRIDE; Q1HVB8; -.
DR GeneID; 5176206; -.
DR KEGG; vg:5176206; -.
DR Proteomes; UP000007639; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0019033; C:viral tegument; IEA:UniProtKB-SubCell.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0039686; P:bidirectional double-stranded viral DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 1.20.190.40; -; 2.
DR HAMAP; MF_04007; HSV_DNBI; 1.
DR InterPro; IPR035989; DBP_sf.
DR InterPro; IPR043031; Viral_ssDBP_head.
DR InterPro; IPR000635; Viral_ssDNA-bd.
DR Pfam; PF00747; Viral_DNA_bp; 1.
DR SUPFAM; SSF118208; SSF118208; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; Host nucleus; Reference proteome; Virion;
KW Virion tegument.
FT CHAIN 1..1128
FT /note="Major DNA-binding protein"
FT /id="PRO_0000375923"
FT REGION 1104..1128
FT /note="Required for nuclear localization"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04007"
SQ SEQUENCE 1128 AA; 123051 MW; 47FA9B476670E873 CRC64;
MQGAQTSEDN LGSQSQPGPC GYIYFYPLAT YPLREVATLG TGYAGHRCLT VPLLCGITVE
PGFSINVKAL HRRPDPNCGL LRATSYHRDI YVFHNAHMVP PIFEGPGLEA LCGETREVFG
YDAYSALPRE SSEPGDFFPE GLDPSAYLGA VAITEAFKER LYSGNLVAIP SLKQEVAVGQ
SASVRVPLYD KEVFPEGVPQ LRQFYNSDLS RCMHEALYTG LAQALRVRRV GKLVELLEKQ
SLQDQAKVAK VAPLKEFPAS TISHPDSGAL MIVDSAACEL AVSYAPAMLE ASHETPASLN
YDSWPLFADC EGPEARVAAL HRYNASLAPH VSTQIFATNS VLYVSGVSKS TGQGKESLFN
SFYMTHGLGT LQEGTWDPCR RPCFSGWGGP DVTGTNGPGN YAVEHLVYAA SFSPNLLARY
AYYLQFCQGQ KSSLTPVPET GSYVAGAAAS PMCSLCEGRA PAVCLNTLFF RLRDRFPPVM
STQRRDPYVI SGASGSYNET DFLGNFLNFI DKEDDGQRPD DEPRYTYWQL NQNLLERLSR
LGIDAEGKLE KEPHGPRDFV KMFKDVDAAV DAEVVQFMNS MAKNNITYKD LVKSCYHVMQ
YSCNPFAQPA CPIFTQLFYR SLLTILQDIS LPICMCYEND NPGLGQSPPE WLKGHYQTLC
TNFRSLAIDK GVLTAKEAKV VHGEPTCDLP DLDAALQGRV YGRRLPVRMS KVLMLCPRNI
KIKNRVVFTG ENAALQNSFI KSTTRRENYI INGPYMKFLN TYHKTLFPDT KLSSLYLWHN
FSRRRSVPVP SGASAEEYSD LALFVDGGSR AHEESNVIDV VPGNLVTYAK QRLNNAILKA
CGQTQFYISL IQGLVPRTQS VPARDYPHVL GTRAVESAAA YAEATSSLTA TTVVCAATDC
LSQVCKARPV VTLPVTINKY TGVNGNNQIF QAGNLGYFMG RGVDRNLLQA PGAGLRKQAG
GSSMRKKFVF ATPTLGLTVK RRTQAATTYE IENIRAGLEA IISQKQEEDC VFDVVCNLVD
AMGEACASLT RDDAEYLLGR FSVLADSVLE TLATIASSGI EWTAGAARDF LEGVWGGPGA
AQDNFISVAE PVSTASQASA GLLLGGGGQG SGGRRKRRLA TVLPGLEV