DNBI_EBVB9
ID DNBI_EBVB9 Reviewed; 1128 AA.
AC P03227; Q777A7;
DT 21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
DT 21-JUL-1986, sequence version 1.
DT 23-FEB-2022, entry version 91.
DE RecName: Full=Major DNA-binding protein {ECO:0000255|HAMAP-Rule:MF_04007};
GN Name=DBP {ECO:0000255|HAMAP-Rule:MF_04007}; ORFNames=BALF2;
OS Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.
OX NCBI_TaxID=10377;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=6087149; DOI=10.1038/310207a0;
RA Baer R., Bankier A.T., Biggin M.D., Deininger P.L., Farrell P.J.,
RA Gibson T.J., Hatfull G., Hudson G.S., Satchwell S.C., Seguin C.,
RA Tuffnell P.S., Barrell B.G.;
RT "DNA sequence and expression of the B95-8 Epstein-Barr virus genome.";
RL Nature 310:207-211(1984).
RN [2]
RP FUNCTION.
RX PubMed=8806519; DOI=10.1006/viro.1996.0432;
RA Tsurumi T., Kobayashi A., Tamai K., Yamada H., Daikoku T., Yamashita Y.,
RA Nishiyama Y.;
RT "Epstein-Barr virus single-stranded DNA-binding protein: purification,
RT characterization, and action on DNA synthesis by the viral DNA
RT polymerase.";
RL Virology 222:352-364(1996).
RN [3]
RP INTERACTION WITH BALF5; BMRF1 AND BGLF5.
RX PubMed=9434720; DOI=10.1006/viro.1997.8891;
RA Zeng Y., Middeldorp J., Madjar J.J., Ooka T.;
RT "A major DNA binding protein encoded by BALF2 open reading frame of
RT Epstein-Barr virus (EBV) forms a complex with other EBV DNA-binding
RT proteins: DNAase, EA-D, and DNA polymerase.";
RL Virology 239:285-295(1997).
RN [4]
RP SUBCELLULAR LOCATION.
RX PubMed=15534216; DOI=10.1073/pnas.0407320101;
RA Johannsen E., Luftig M., Chase M.R., Weicksel S., Cahir-McFarland E.,
RA Illanes D., Sarracino D., Kieff E.;
RT "Proteins of purified Epstein-Barr virus.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:16286-16291(2004).
RN [5]
RP SUBCELLULAR LOCATION.
RX PubMed=15731235; DOI=10.1128/jvi.79.6.3409-3418.2005;
RA Daikoku T., Kudoh A., Fujita M., Sugaya Y., Isomura H., Shirata N.,
RA Tsurumi T.;
RT "Architecture of replication compartments formed during Epstein-Barr virus
RT lytic replication.";
RL J. Virol. 79:3409-3418(2005).
CC -!- FUNCTION: Plays several crucial roles in viral infection. Participates
CC in the opening of the viral DNA origin to initiate replication by
CC interacting with the origin-binding protein. May disrupt loops,
CC hairpins and other secondary structures present on ssDNA to reduce and
CC eliminate pausing of viral DNA polymerase at specific sites during
CC elongation. Promotes viral DNA recombination by performing strand-
CC transfer, characterized by the ability to transfer a DNA strand from a
CC linear duplex to a complementary single-stranded DNA circle. Can also
CC catalyze the renaturation of complementary single strands.
CC Additionally, reorganizes the host cell nucleus, leading to the
CC formation of prereplicative sites and replication compartments. This
CC process is driven by the protein which can form double-helical
CC filaments in the absence of DNA. {ECO:0000255|HAMAP-Rule:MF_04007,
CC ECO:0000269|PubMed:9434720}.
CC -!- SUBUNIT: Homooligomers. Forms double-helical filaments necessary for
CC the formation of replication compartments within the host nucleus.
CC Interacts with the origin-binding protein. Interacts with the helicase
CC primase complex; this interaction stimulates primer synthesis activity
CC of the helicase-primase complex. Interacts with the DNA polymerase.
CC Interacts with the alkaline exonuclease; this interaction increases its
CC nuclease processivity. {ECO:0000255|HAMAP-Rule:MF_04007,
CC ECO:0000269|PubMed:8806519}.
CC -!- SUBCELLULAR LOCATION: Virion tegument {ECO:0000269|PubMed:15534216}.
CC Host nucleus {ECO:0000255|HAMAP-Rule:MF_04007,
CC ECO:0000269|PubMed:15731235}. Note=In the absence of DNA replication,
CC found in the nuclear framework-associated structures (prereplicative
CC sites). As viral DNA replication proceeds, it migrates to globular
CC intranuclear structures (replication compartments). {ECO:0000255|HAMAP-
CC Rule:MF_04007}.
CC -!- SIMILARITY: Belongs to the herpesviridae major DNA-binding protein
CC family. {ECO:0000255|HAMAP-Rule:MF_04007}.
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DR EMBL; V01555; CAA24808.1; -; Genomic_DNA.
DR EMBL; AJ507799; CAD53467.1; -; Genomic_DNA.
DR PIR; A43045; QQBE47.
DR RefSeq; YP_401717.1; NC_007605.1.
DR SMR; P03227; -.
DR IntAct; P03227; 8.
DR MINT; P03227; -.
DR PRIDE; P03227; -.
DR DNASU; 3783678; -.
DR GeneID; 3783678; -.
DR KEGG; vg:3783678; -.
DR Proteomes; UP000153037; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0019033; C:viral tegument; IEA:UniProtKB-SubCell.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0039686; P:bidirectional double-stranded viral DNA replication; IDA:UniProtKB.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 1.20.190.40; -; 2.
DR HAMAP; MF_04007; HSV_DNBI; 1.
DR InterPro; IPR035989; DBP_sf.
DR InterPro; IPR043031; Viral_ssDBP_head.
DR InterPro; IPR000635; Viral_ssDNA-bd.
DR Pfam; PF00747; Viral_DNA_bp; 1.
DR SUPFAM; SSF118208; SSF118208; 1.
PE 1: Evidence at protein level;
KW DNA replication; DNA-binding; Host nucleus; Reference proteome; Virion;
KW Virion tegument.
FT CHAIN 1..1128
FT /note="Major DNA-binding protein"
FT /id="PRO_0000115758"
FT REGION 1104..1128
FT /note="Required for nuclear localization"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04007"
SQ SEQUENCE 1128 AA; 123122 MW; 283D5258031A16D6 CRC64;
MQGAQTSEDN LGSQSQPGPC GYIYFYPLAT YPLREVATLG TGYAGHRCLT VPLLCGITVE
PGFSINVKAL HRRPDPNCGL LRATSYHRDI YVFHNAHMVP PIFEGPGLEA LCGETREVFG
YDAYSALPRE SSKPGDFFPE GLDPSAYLGA VAITEAFKER LYSGNLVAIP SLKQEVAVGQ
SASVRVPLYD KEVFPEGVPQ LRQFYNSDLS RCMHEALYTG LAQALRVRRV GKLVELLEKQ
SLQDQAKVAK VAPLKEFPAS TISHPDSGAL MIVDSAACEL AVSYAPAMLE ASHETPASLN
YDSWPLFADC EGPEARVAAL HRYNASLAPH VSTQIFATNS VLYVSGVSKS TGQGKESLFN
SFYMTHGLGT LQEGTWDPCR RPCFSGWGGP DVTGTNGPGN YAVEHLVYAA SFSPNLLARY
AYYLQFCQGQ KSSLTPVPET GSYVAGAAAS PMCSLCEGRA PAVCLNTLFF RLRDRFPPVM
STQRRDPYVI SGASGSYNET DFLGNFLNFI DKEDDGQRPD DEPRYTYWQL NQNLLERLSR
LGIDAEGKLE KEPHGPRDFV KMFKDVDAAV DAEVVQFMNS MAKNNITYKD LVKSCYHVMQ
YSCNPFAQPA CPIFTQLFYR SLLTILQDIS LPICMCYEND NPGLGQSPPE WLKGHYQTLC
TNFRSLAIDK GVLTAKEAKV VHGEPTCDLP DLDAALQGRV YGRRLPVRMS KVLMLCPRNI
KIKNRVVFTG ENAALQNSFI KSTTRRENYI INGPYMKFLN TYHKTLFPDT KLSSLYLWHN
FSRRRSVPVP SGASAEEYSD LALFVDGGSR AHEESNVIDV VPGNLVTYAK QRLNNAILKA
CGQTQFYISL IQGLVPRTQS VPARDYPHVL GTRAVESAAA YAEATSSLTA TTVVCAATDC
LSQVCKARPV VTLPVTINKY TGVNGNNQIF QAGNLGYFMG RGVDRNLLQA PGAGLRKQAG
GSSMRKKFVF ATPTLGLTVK RRTQAATTYE IENIRAGLEA IISQKQEEDC VFDVVCNLVD
AMGEACASLT RDDAEYLLGR FSVLADSVLE TLATIASSGI EWTAEAARDF LEGVWGGPGA
AQDNFISVAE PVSTASQASA GLLLGGGGQG SGGRRKRRLA TVLPGLEV