DNBI_ELHVK
ID DNBI_ELHVK Reviewed; 1143 AA.
AC Q18LF9;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 23-FEB-2022, entry version 44.
DE RecName: Full=Major DNA-binding protein {ECO:0000255|HAMAP-Rule:MF_04007};
GN Name=DBP {ECO:0000255|HAMAP-Rule:MF_04007};
OS Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) (EIHV-1)
OS (Elephant endotheliotropic herpesvirus).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Proboscivirus.
OX NCBI_TaxID=654902;
OH NCBI_TaxID=9783; Elephas maximus (Indian elephant).
OH NCBI_TaxID=9785; Loxodonta africana (African elephant).
OH NCBI_TaxID=99490; Loxodonta cyclotis (African forest elephant).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=17507487; DOI=10.1128/jvi.00255-07;
RA Ehlers B., Kuchler J., Yasmum N., Dural G., Voigt S., Schmidt-Chanasit J.,
RA Jakel T., Matuschka F.R., Richter D., Essbauer S., Hughes D.J., Summers C.,
RA Bennett M., Stewart J.P., Ulrich R.G.;
RT "Identification of novel rodent herpesviruses, including the first
RT gammaherpesvirus of Mus musculus.";
RL J. Virol. 81:8091-8100(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=11172087; DOI=10.1099/0022-1317-82-3-475;
RA Ehlers B., Burkhardt S., Goltz M., Bergmann V., Ochs A., Weiler H.,
RA Hentschke J.;
RT "Genetic and ultrastructural characterization of a European isolate of the
RT fatal endotheliotropic elephant herpesvirus.";
RL J. Gen. Virol. 82:475-482(2001).
CC -!- FUNCTION: Plays several crucial roles in viral infection. Participates
CC in the opening of the viral DNA origin to initiate replication by
CC interacting with the origin-binding protein. May disrupt loops,
CC hairpins and other secondary structures present on ssDNA to reduce and
CC eliminate pausing of viral DNA polymerase at specific sites during
CC elongation. Promotes viral DNA recombination by performing strand-
CC transfer, characterized by the ability to transfer a DNA strand from a
CC linear duplex to a complementary single-stranded DNA circle. Can also
CC catalyze the renaturation of complementary single strands.
CC Additionally, reorganizes the host cell nucleus, leading to the
CC formation of prereplicative sites and replication compartments. This
CC process is driven by the protein which can form double-helical
CC filaments in the absence of DNA. {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SUBUNIT: Homooligomers. Forms double-helical filaments necessary for
CC the formation of replication compartments within the host nucleus.
CC Interacts with the origin-binding protein. Interacts with the helicase
CC primase complex; this interaction stimulates primer synthesis activity
CC of the helicase-primase complex. Interacts with the DNA polymerase.
CC Interacts with the alkaline exonuclease; this interaction increases its
CC nuclease processivity. {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SUBCELLULAR LOCATION: Host nucleus {ECO:0000255|HAMAP-Rule:MF_04007}.
CC Note=In the absence of DNA replication, found in the nuclear framework-
CC associated structures (prereplicative sites). As viral DNA replication
CC proceeds, it migrates to globular intranuclear structures (replication
CC compartments). {ECO:0000255|HAMAP-Rule:MF_04007}.
CC -!- SIMILARITY: Belongs to the herpesviridae major DNA-binding protein
CC family. {ECO:0000255|HAMAP-Rule:MF_04007}.
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DR EMBL; AF322977; ABG36560.1; -; Genomic_DNA.
DR SMR; Q18LF9; -.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0039686; P:bidirectional double-stranded viral DNA replication; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 1.20.190.40; -; 1.
DR HAMAP; MF_04007; HSV_DNBI; 1.
DR InterPro; IPR035989; DBP_sf.
DR InterPro; IPR043031; Viral_ssDBP_head.
DR InterPro; IPR000635; Viral_ssDNA-bd.
DR Pfam; PF00747; Viral_DNA_bp; 1.
DR SUPFAM; SSF118208; SSF118208; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; Host nucleus.
FT CHAIN 1..1143
FT /note="Major DNA-binding protein"
FT /id="PRO_0000408151"
FT REGION 1140..1143
FT /note="Required for nuclear localization"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_04007"
SQ SEQUENCE 1143 AA; 130078 MW; 2E75DE55CF150E70 CRC64;
MSSDDNNIAS SASSGHGAWI YITEKTPDVL DILNRLVLTS ADSDVTIAPL LYDVTVEPGF
ELTVKCPLML TDNNVILKLS NFMPCVFIIN STSSEDFRFC EDVVGNVSEI CEGAASRYGY
TADFTEFNER TETTDSDVCS NVNVPESDYF VYIACTYGYK ELLFKGYLIP HWQDLRDISI
GNRRGYKIPL LSPFLFTQCK DDTVQLTDQF ILDNGFYNPD LTKTLYSYIF RPLAVSLRYL
DVTHLISVTL NQYITDTHAT AKLCDKKVYT CHGNNKLSTG DRDVLALCDI LANEVTVSYL
TPFLDSAYDA PSTLDFYSWP IVKDKTHAEI LENLDQFLLH MSVHIGTLIF SGNSVLYQNK
ISKVGGQSDG SNGQSVEGLL KSIYHTTGIQ LLYEDGYDDT RSLVRQHTAK PKNLKFNMDH
LSFGASFSSH VLTKIVWFLN RSEEYKTTQS VSSTCYLVIN SSTGTCTACD GKHCNTCIGA
LMCRMATRFP NINRQQKKEP CVTTLLTRMF ADMTILGSFG KKYNTERDTQ QKDGRVSAEP
LDKAKYVLNI LDYCKRECLI DSDGNDTLKI SSKQEFIKII TGLNRTIDDE LIKLLSDMRK
HSNAKDDLNN STMSFTLDLN PHAYAFSPLL QFVYMKTLVN ILESLAIVVI AEKISSYPMT
QSAYSRWVKQ HFQSVYSEFK KSIYKKGFLT LSDYKMKNTT TNDTFTDFSH LKRDYKIDNT
VRSSIATVNY QCRLWNFHVS SLRDFRIKYK PIPKNKDSPY FQKADKGIQN PVCGPLSFLI
TRFHKDIFPN VNVSPMTLWQ RIYSNTLKNF NVDLGDKHDV ETFIKFMFEQ TVEYEGSNSI
DVRPETILQY IEFRFVNRLL HASGHRGQYI GIVQALCTTL SDTKVDGLPC YLDSSRTFGT
VSEYHAYCRE YNGTVKVGRT RPYCNTNGMF ERRPLVTVPY ALEKYTGAAG NASIFQCGQL
GYFSGTGIDR NLGMINRTSD YNFMRRKHIF CTPLTDVLFT KISRGAHVFD FDMLKQRIKQ
LLDEHCGGFD IELAILSEIL KHVKEPNYND LLFITGYQEH IASSLFDKIK VLDELEISSY
SIESLQEIFP EKEELNDTEA TGSGYDFSFI IPKATDVDEI TGLNIQEFTN IEDETPLVKR
MRL