DNE23_AGRFC
ID DNE23_AGRFC Reviewed; 1087 AA.
AC Q8U642; Q7D2J1;
DT 19-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Error-prone DNA polymerase 3 {ECO:0000255|HAMAP-Rule:MF_01902};
DE EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01902};
GN Name=dnaE2-3 {ECO:0000255|HAMAP-Rule:MF_01902}; OrderedLocusNames=Atu6093;
GN ORFNames=AGR_pTi_175;
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OG Plasmid pTiC58.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970;
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- FUNCTION: DNA polymerase involved in damage-induced mutagenesis and
CC translesion synthesis (TLS). It is not the major replicative DNA
CC polymerase. {ECO:0000255|HAMAP-Rule:MF_01902}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_01902};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01902}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-C family. DnaE2
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_01902}.
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DR EMBL; AE007871; AAK91053.1; -; Genomic_DNA.
DR PIR; AC3239; AC3239.
DR RefSeq; NP_396612.1; NC_003065.3.
DR RefSeq; WP_010974875.1; NC_003065.3.
DR AlphaFoldDB; Q8U642; -.
DR SMR; Q8U642; -.
DR EnsemblBacteria; AAK91053; AAK91053; Atu6093.
DR KEGG; atu:Atu6093; -.
DR PATRIC; fig|176299.10.peg.5300; -.
DR HOGENOM; CLU_001600_4_0_5; -.
DR OMA; HVEAREQ; -.
DR PhylomeDB; Q8U642; -.
DR BioCyc; AGRO:ATU6093-MON; -.
DR Proteomes; UP000000813; Plasmid Ti.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR HAMAP; MF_01902; DNApol_error_prone; 1.
DR InterPro; IPR011708; DNA_pol3_alpha_NTPase_dom.
DR InterPro; IPR040982; DNA_pol3_finger.
DR InterPro; IPR023073; DNA_pol_error_prone.
DR InterPro; IPR029460; DNAPol_HHH.
DR InterPro; IPR004013; PHP_dom.
DR InterPro; IPR003141; Pol/His_phosphatase_N.
DR InterPro; IPR016195; Pol/histidinol_Pase-like.
DR InterPro; IPR004805; PolC_alpha.
DR PANTHER; PTHR32294; PTHR32294; 1.
DR PANTHER; PTHR32294:SF4; PTHR32294:SF4; 1.
DR Pfam; PF07733; DNA_pol3_alpha; 1.
DR Pfam; PF17657; DNA_pol3_finger; 1.
DR Pfam; PF14579; HHH_6; 1.
DR Pfam; PF02811; PHP; 1.
DR SMART; SM00481; POLIIIAc; 1.
DR SUPFAM; SSF89550; SSF89550; 1.
DR TIGRFAMs; TIGR00594; polc; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA damage; DNA repair; DNA replication;
KW DNA-directed DNA polymerase; Nucleotidyltransferase; Plasmid;
KW Reference proteome; Transferase.
FT CHAIN 1..1087
FT /note="Error-prone DNA polymerase 3"
FT /id="PRO_0000103364"
FT REGION 1040..1064
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1087 AA; 122156 MW; 66C81289A3841EC6 CRC64;
MSYAELQVTT HFSFLRGASS AQELFETAKA LGIEALGVVD RNSLAGIVRA LEASRATGLR
LVIGCRLDLA DGMSVLVYPT DRAAYSRLTR LITLGKSRGG KNNCLLHWDD VVAYTDGMIG
ILVPDLPDDL CGIQLRKMAE LFGDRAYVSL CLRRRQNDQL RLHEISNLAT RFKVRTVVTN
DVLFHEPGRR QLQDIVTCIR TRTTIDEVGF ERERHADRYL KPPEEMERLF PRYRQALART
MEIVRRCTFS LEELTYQYPE EAIVPGKDAQ ASLEHYVWQC VPDRYPEGLP PDVLKVVRHE
LDLIRTMKYA PYFLTVFSIV RYARSQGILC QGRGSAANSA VCYILGITSI DPSTNDLLFE
RFVSQERDEP PDIDVDFEHE RREEVIQWIY RTYTREKAAL CATVTRYRAR GAIRDVGKAL
GLPEDVIKAL SSGMWSWSEE VCDRNVRELN LNPDDRRLVL TLKLAQQLMG APRHLGQHPG
GFVLTHDRLD DLVPIEPATM KDRQIIEWDK DDVEALKFMK VDILALGMLT CMAKAFDLIR
EHKDRDLDLS KIEQEDSVTY AMIRKADTLG TFQIESRAQM AMLPRLKPRT FYDLVVQVAI
VRPGPIQGDM VHPYLRRREG KEAVEYPTPE LEAVLGKTLG VPLFQESAMR VAMVCAGFTG
GEADQLRKSM ATFKFTGGVS QFKDKLVSGM VRNGYAPEFA EKTFSQLEGF GSYGFPESHA
ASFALIAYAS SYIKCHYPEA FCAALINSQP MGFYAPAQIV GDARAHGVEV RPVCINRSRW
DCTLERIGNS DRHAVRLGFR QVKGLAVADA ARVVAARMNN AFVSVDDMWR RSGVPSEALV
QLAKADAFLP SLKLERRDAL WAIKALRDEP LPLFAAAAER EMAAIAEQQE PGVALRQMTD
GHNVIEDYSH TGLTLRQHPI AFLRKDLSVR NIITCAEAMN SRDGRWVYTA GLVLVRQKPG
SAKGVMFITI EDETGPANLV VWPTLFEKRR RAVLGSSMMA INGRIQREGE VVHLVAQQLF
DLSGDLTGLA DRDEEFKLPA GRGDEFAHGS PGSSDTRDKS KPVVAPRDIF TPDLHIDTLK
IKSRNFH