DNJ72_ARATH
ID DNJ72_ARATH Reviewed; 184 AA.
AC Q0WTI8; O80684; Q84MC8;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Chaperone protein dnaJ 72;
DE Short=AtDjC72;
DE Short=AtJ72;
GN Name=ATJ72; Synonyms=C72, LCR51; OrderedLocusNames=At2g41000;
GN ORFNames=T3K9.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=11599562; DOI=10.1379/1466-1268(2001)006<0209:tjdpoa>2.0.co;2;
RA Miernyk J.A.;
RT "The J-domain proteins of Arabidopsis thaliana: an unexpectedly large and
RT diverse family of chaperones.";
RL Cell Stress Chaperones 6:209-218(2001).
CC -!- FUNCTION: Plays a continuous role in plant development probably in the
CC structural organization of compartments. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=1;
CC Comment=A number of isoforms are produced. According to EST
CC sequences.;
CC Name=1;
CC IsoId=Q0WTI8-1; Sequence=Displayed;
CC -!- SIMILARITY: Belongs to the DnaJ family. C/III subfamily. {ECO:0000305}.
CC -!- CAUTION: Was originally erroneously termed LCR51 before the split of
CC the gene model. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD12011.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At2g40997 and At2g41000.; Evidence={ECO:0000305};
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DR EMBL; AC004261; AAD12011.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002685; AEC09913.1; -; Genomic_DNA.
DR EMBL; BT006395; AAP21203.1; -; mRNA.
DR EMBL; AK227566; BAE99560.1; -; mRNA.
DR PIR; T02119; T02119.
DR RefSeq; NP_181633.3; NM_129665.5. [Q0WTI8-1]
DR AlphaFoldDB; Q0WTI8; -.
DR SMR; Q0WTI8; -.
DR STRING; 3702.AT2G41000.2; -.
DR PaxDb; Q0WTI8; -.
DR PRIDE; Q0WTI8; -.
DR ProteomicsDB; 222609; -. [Q0WTI8-1]
DR EnsemblPlants; AT2G41000.1; AT2G41000.1; AT2G41000. [Q0WTI8-1]
DR GeneID; 818700; -.
DR Gramene; AT2G41000.1; AT2G41000.1; AT2G41000. [Q0WTI8-1]
DR KEGG; ath:AT2G41000; -.
DR Araport; AT2G41000; -.
DR eggNOG; KOG0714; Eukaryota.
DR HOGENOM; CLU_085531_0_0_1; -.
DR InParanoid; Q0WTI8; -.
DR OMA; EMVLRFM; -.
DR PhylomeDB; Q0WTI8; -.
DR PRO; PR:Q0WTI8; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q0WTI8; baseline and differential.
DR Genevisible; Q0WTI8; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR CDD; cd06257; DnaJ; 1.
DR Gene3D; 1.10.287.110; -; 1.
DR InterPro; IPR001623; DnaJ_domain.
DR InterPro; IPR018253; DnaJ_domain_CS.
DR InterPro; IPR036869; J_dom_sf.
DR Pfam; PF00226; DnaJ; 1.
DR PRINTS; PR00625; JDOMAIN.
DR SMART; SM00271; DnaJ; 1.
DR SUPFAM; SSF46565; SSF46565; 1.
DR PROSITE; PS00636; DNAJ_1; 1.
DR PROSITE; PS50076; DNAJ_2; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Chaperone; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..184
FT /note="Chaperone protein dnaJ 72"
FT /id="PRO_0000071087"
FT TRANSMEM 133..150
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 3..73
FT /note="J"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00286"
SQ SEQUENCE 184 AA; 20646 MW; 9161DED9A246F069 CRC64;
MVDHYQVLGV TRNATKKEVK DAFRRLAIKY HPDKHAQSPE HVRHNATVRF KLVSEAYEVL
NDDLKRASYN AGSDSDCFRR TSGSYSNPYG NRGGRAQGSG YGYGYGYSTR NRQASSFSSG
FDSTFRYLTT RAFLLNLALA GGLYFAFTAI DTSGETLWKM RNSGKSFEEA MESIEKSKSH
KDEG