DODA_BETVU
ID DODA_BETVU Reviewed; 268 AA.
AC Q70FG7;
DT 16-OCT-2013, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 62.
DE RecName: Full=4,5-DOPA dioxygenase extradiol;
DE EC=1.13.11.29;
GN Name=DODA;
OS Beta vulgaris (Sugar beet).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC Caryophyllales; Chenopodiaceae; Betoideae; Beta.
OX NCBI_TaxID=161934;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Bikores Monogerm;
RX PubMed=14730069; DOI=10.1104/pp.103.031914;
RA Christinet L., Burdet F.X., Zaiko M., Hinz U.G., Zryd J.-P.;
RT "Characterization and functional identification of a novel plant 4,5-
RT extradiol dioxygenase involved in betalain pigment biosynthesis in
RT Portulaca grandiflora.";
RL Plant Physiol. 134:265-274(2004).
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, BIOPHYSICOCHEMICAL PROPERTIES, AND SUBUNIT.
RX PubMed=22270561; DOI=10.1007/s00425-012-1593-2;
RA Gandia-Herrero F., Garcia-Carmona F.;
RT "Characterization of recombinant Beta vulgaris 4,5-DOPA-extradiol-
RT dioxygenase active in the biosynthesis of betalains.";
RL Planta 236:91-100(2012).
CC -!- FUNCTION: Opens the cyclic ring of dihydroxy-phenylalanine (DOPA)
CC between carbons 4 and 5, thus producing an unstable seco-DOPA that
CC rearranges nonenzymatically to betalamic acid. Produces mainly (S)-
CC betalamic acid. {ECO:0000269|PubMed:22270561}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=L-dopa + O2 = 4-(L-alanin-3-yl)-2-hydroxy-cis,cis-muconate 6-
CC semialdehyde + H(+); Xref=Rhea:RHEA:21220, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:15379, ChEBI:CHEBI:57504, ChEBI:CHEBI:57639;
CC EC=1.13.11.29; Evidence={ECO:0000269|PubMed:22270561};
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000250};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=6.9 mM for L-dopa {ECO:0000269|PubMed:22270561};
CC Vmax=1.2 umol/min/mg enzyme {ECO:0000269|PubMed:22270561};
CC Note=kcat is 0.095 sec(-1) for L-dopa.;
CC pH dependence:
CC Optimum pH is 8.5. {ECO:0000269|PubMed:22270561};
CC -!- PATHWAY: Pigment biosynthesis; betalain biosynthesis.
CC -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:22270561}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000305}.
CC -!- MISCELLANEOUS: Supplementation with Fe(2+) in the reaction medium is
CC not necessary to detect activity in contrast to the results found for
CC the M. jalapa enzyme (AC B6F0W8) (PubMed:22270561).
CC {ECO:0000305|PubMed:22270561}.
CC -!- SIMILARITY: Belongs to the DODA-type extradiol aromatic ring-opening
CC dioxygenase family. {ECO:0000305}.
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DR EMBL; AJ583017; CAE47100.1; -; mRNA.
DR AlphaFoldDB; Q70FG7; -.
DR SMR; Q70FG7; -.
DR BioCyc; MetaCyc:MON-19377; -.
DR UniPathway; UPA00278; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0046566; F:DOPA dioxygenase activity; IDA:UniProtKB.
DR GO; GO:0008198; F:ferrous iron binding; IEA:InterPro.
DR GO; GO:0050297; F:stizolobate synthase activity; IDA:UniProtKB.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006725; P:cellular aromatic compound metabolic process; IDA:UniProtKB.
DR CDD; cd07363; 45_DOPA_Dioxygenase; 1.
DR InterPro; IPR014436; Extradiol_dOase_DODA.
DR InterPro; IPR004183; Xdiol_dOase_suB.
DR Pfam; PF02900; LigB; 1.
DR PIRSF; PIRSF006157; Doxgns_DODA; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Dioxygenase; Metal-binding; Oxidoreductase; Zinc.
FT CHAIN 1..268
FT /note="4,5-DOPA dioxygenase extradiol"
FT /id="PRO_0000424076"
FT BINDING 15
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 53
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 175
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 229
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
SQ SEQUENCE 268 AA; 29616 MW; D47C6D4466454C63 CRC64;
MGSEDNIKET FFISHGTPMM AIDDSKPSKK FLESWREKIF SKKPKAILVI SAHWETDQPS
VNVVDINDTI YDFRGFPARL YQFKYSAPGS PELANRIQDL LAGSGFKSVN TDKKRGLDHG
AWVPLMLMYP EADIPVCQLS VQSHLDGTHH YKLGQALAPL KDEGVLIIGS GSATHPSNGT
PPCSDGVAPW AAAFDSWLET ALTNGSYEEV NKYETKAPNW KLAHPWPEHF YPLHVAMGAA
GENSKAELIH NSWDGGIMSY GSYKFTST