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DOF45_ARATH
ID   DOF45_ARATH             Reviewed;         249 AA.
AC   O49550; C0SVI7;
DT   09-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-1998, sequence version 1.
DT   03-AUG-2022, entry version 126.
DE   RecName: Full=Dof zinc finger protein DOF4.5;
DE            Short=AtDOF4.5;
GN   Name=DOF4.5; OrderedLocusNames=At4g21080; ORFNames=F7J7.20;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617198; DOI=10.1038/47134;
RA   Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA   Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA   Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA   de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA   Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA   Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA   Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA   Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA   Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA   Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA   Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA   Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA   Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA   Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA   Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA   Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA   Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA   Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA   Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA   Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA   Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA   Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA   Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA   Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA   Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA   Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA   Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA   de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA   Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA   Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA   Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA   Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA   Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA   Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA   Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA   Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA   Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA   O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA   Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA   Martienssen R., McCombie W.R.;
RT   "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL   Nature 402:769-777(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA   Takagi M.;
RT   "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12475498; DOI=10.1016/s1360-1385(02)02362-2;
RA   Yanagisawa S.;
RT   "The Dof family of plant transcription factors.";
RL   Trends Plant Sci. 7:555-560(2002).
CC   -!- FUNCTION: Transcription factor that binds specifically to a 5'-AA[AG]G-
CC       3' consensus core sequence. {ECO:0000250}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR   EMBL; AL021960; CAA17527.1; -; Genomic_DNA.
DR   EMBL; AL161554; CAB79108.1; -; Genomic_DNA.
DR   EMBL; CP002687; AEE84397.1; -; Genomic_DNA.
DR   EMBL; AB493690; BAH30528.1; -; Genomic_DNA.
DR   PIR; T04939; T04939.
DR   RefSeq; NP_193840.1; NM_118226.1.
DR   AlphaFoldDB; O49550; -.
DR   BioGRID; 13146; 2.
DR   IntAct; O49550; 2.
DR   PaxDb; O49550; -.
DR   PRIDE; O49550; -.
DR   DNASU; 827855; -.
DR   EnsemblPlants; AT4G21080.1; AT4G21080.1; AT4G21080.
DR   GeneID; 827855; -.
DR   Gramene; AT4G21080.1; AT4G21080.1; AT4G21080.
DR   KEGG; ath:AT4G21080; -.
DR   Araport; AT4G21080; -.
DR   TAIR; locus:2127353; AT4G21080.
DR   HOGENOM; CLU_108202_0_0_1; -.
DR   InParanoid; O49550; -.
DR   OMA; IQTIPPM; -.
DR   OrthoDB; 1418715at2759; -.
DR   PhylomeDB; O49550; -.
DR   PRO; PR:O49550; -.
DR   Proteomes; UP000006548; Chromosome 4.
DR   ExpressionAtlas; O49550; baseline and differential.
DR   Genevisible; O49550; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:TAIR.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR   InterPro; IPR045174; Dof.
DR   InterPro; IPR003851; Znf_Dof.
DR   PANTHER; PTHR31992; PTHR31992; 1.
DR   Pfam; PF02701; zf-Dof; 1.
DR   PROSITE; PS01361; ZF_DOF_1; 1.
DR   PROSITE; PS50884; ZF_DOF_2; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation; Zinc; Zinc-finger.
FT   CHAIN           1..249
FT                   /note="Dof zinc finger protein DOF4.5"
FT                   /id="PRO_0000074288"
FT   ZN_FING         25..79
FT                   /note="Dof-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT   BINDING         27
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT   BINDING         30
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT   BINDING         52
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT   BINDING         55
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
SQ   SEQUENCE   249 AA;  28094 MW;  A582E3589F1D835C CRC64;
     MDNLNVFANE DNQVNDVKPP PPPPRVCARC DSDNTKFCYY NNYCEFQPRY FCKNCRRYWT
     HGGALRNIPI GGSSRAKRAR VNQPSVARMV SVETQRGNNQ PFSNVQENVH LVGSFGASSS
     SSVGAVGNLF GSLYDIHGGM VTNLHPTRTV RPNHRLAFHD GSFEQDYYDV GSDNLLVNQQ
     VGGYGYHMNP VDQFKWNQSF NNTMNMNYNN DSTSGSSRGS DMNVNHDNKK IRYRNSVIMH
     PCHLEKDGP
 
 
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