DOF58_ARATH
ID DOF58_ARATH Reviewed; 225 AA.
AC Q9FGD6; A1A6K3;
DT 09-NOV-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 118.
DE RecName: Full=Dof zinc finger protein DOF5.8;
DE Short=AtDOF5.8;
GN Name=DOF5.8; OrderedLocusNames=At5g66940; ORFNames=K8A10.1;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12475498; DOI=10.1016/s1360-1385(02)02362-2;
RA Yanagisawa S.;
RT "The Dof family of plant transcription factors.";
RL Trends Plant Sci. 7:555-560(2002).
CC -!- FUNCTION: Transcription factor that binds specifically to a 5'-AA[AG]G-
CC 3' consensus core sequence. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
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DR EMBL; AB026640; BAB08933.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98282.1; -; Genomic_DNA.
DR EMBL; BT029523; ABL66779.1; -; mRNA.
DR RefSeq; NP_201495.1; NM_126093.2.
DR AlphaFoldDB; Q9FGD6; -.
DR BioGRID; 22070; 13.
DR IntAct; Q9FGD6; 13.
DR STRING; 3702.AT5G66940.1; -.
DR PaxDb; Q9FGD6; -.
DR PRIDE; Q9FGD6; -.
DR ProteomicsDB; 222129; -.
DR DNASU; 836828; -.
DR EnsemblPlants; AT5G66940.1; AT5G66940.1; AT5G66940.
DR GeneID; 836828; -.
DR Gramene; AT5G66940.1; AT5G66940.1; AT5G66940.
DR KEGG; ath:AT5G66940; -.
DR Araport; AT5G66940; -.
DR TAIR; locus:2158078; AT5G66940.
DR eggNOG; ENOG502QUV1; Eukaryota.
DR HOGENOM; CLU_036438_6_0_1; -.
DR InParanoid; Q9FGD6; -.
DR OMA; WQFEGQE; -.
DR OrthoDB; 1353534at2759; -.
DR PhylomeDB; Q9FGD6; -.
DR PRO; PR:Q9FGD6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FGD6; baseline and differential.
DR Genevisible; Q9FGD6; AT.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:TAIR.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IDA:TAIR.
DR GO; GO:0008270; F:zinc ion binding; IDA:TAIR.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
DR InterPro; IPR045174; Dof.
DR InterPro; IPR003851; Znf_Dof.
DR PANTHER; PTHR31992; PTHR31992; 1.
DR Pfam; PF02701; zf-Dof; 1.
DR PROSITE; PS01361; ZF_DOF_1; 1.
DR PROSITE; PS50884; ZF_DOF_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Metal-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation; Zinc; Zinc-finger.
FT CHAIN 1..225
FT /note="Dof zinc finger protein DOF5.8"
FT /id="PRO_0000074298"
FT ZN_FING 32..86
FT /note="Dof-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 34
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT BINDING 37
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT BINDING 59
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
FT BINDING 62
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00071"
SQ SEQUENCE 225 AA; 24118 MW; 313D80AC406FC09D CRC64;
MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY NFSQPRHFCK
SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV GSRNFPLQAT PVLFPQSSSN
GGITTAKGSA SSFYGGFSSL INYNAAVSRN GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG
ITVWPFSSGA TDAATTTSHI AQIPATWQFE GQESKVGFVS GDYVA
