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DOM_DROME
ID   DOM_DROME               Reviewed;        3198 AA.
AC   Q9NDJ2; Q7YZ94; Q95TN6; Q968U6; Q9I7V8;
DT   13-NOV-2007, integrated into UniProtKB/Swiss-Prot.
DT   13-NOV-2007, sequence version 2.
DT   03-AUG-2022, entry version 156.
DE   RecName: Full=Helicase domino;
DE            EC=3.6.4.-;
GN   Name=dom; ORFNames=CG9696;
OS   Drosophila melanogaster (Fruit fly).
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC   Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea;
OC   Drosophilidae; Drosophila; Sophophora.
OX   NCBI_TaxID=7227;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A AND B), FUNCTION, TISSUE
RP   SPECIFICITY, DEVELOPMENTAL STAGE, AND SUBCELLULAR LOCATION.
RX   PubMed=11262242; DOI=10.1242/dev.128.8.1429;
RA   Ruhf M.-L., Braun A., Papoulas O., Tamkun J.W., Randsholt N., Meister M.;
RT   "The domino gene of Drosophila encodes novel members of the SWI2/SNF2
RT   family of DNA-dependent ATPases, which contribute to the silencing of
RT   homeotic genes.";
RL   Development 128:1429-1441(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Berkeley;
RX   PubMed=10731132; DOI=10.1126/science.287.5461.2185;
RA   Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
RA   Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
RA   George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
RA   Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X., Brandon R.C.,
RA   Rogers Y.-H.C., Blazej R.G., Champe M., Pfeiffer B.D., Wan K.H., Doyle C.,
RA   Baxter E.G., Helt G., Nelson C.R., Miklos G.L.G., Abril J.F., Agbayani A.,
RA   An H.-J., Andrews-Pfannkoch C., Baldwin D., Ballew R.M., Basu A.,
RA   Baxendale J., Bayraktaroglu L., Beasley E.M., Beeson K.Y., Benos P.V.,
RA   Berman B.P., Bhandari D., Bolshakov S., Borkova D., Botchan M.R., Bouck J.,
RA   Brokstein P., Brottier P., Burtis K.C., Busam D.A., Butler H., Cadieu E.,
RA   Center A., Chandra I., Cherry J.M., Cawley S., Dahlke C., Davenport L.B.,
RA   Davies P., de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I.,
RA   Dietz S.M., Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C.,
RA   Dunn P., Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S.,
RA   Fleischmann W., Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M.,
RA   Glasser K., Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
RA   Harris N.L., Harvey D.A., Heiman T.J., Hernandez J.R., Houck J., Hostin D.,
RA   Houston K.A., Howland T.J., Wei M.-H., Ibegwam C., Jalali M., Kalush F.,
RA   Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A., Kimmel B.E., Kodira C.D.,
RA   Kraft C.L., Kravitz S., Kulp D., Lai Z., Lasko P., Lei Y., Levitsky A.A.,
RA   Li J.H., Li Z., Liang Y., Lin X., Liu X., Mattei B., McIntosh T.C.,
RA   McLeod M.P., McPherson D., Merkulov G., Milshina N.V., Mobarry C.,
RA   Morris J., Moshrefi A., Mount S.M., Moy M., Murphy B., Murphy L.,
RA   Muzny D.M., Nelson D.L., Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R.,
RA   Pacleb J.M., Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V.,
RA   Reese M.G., Reinert K., Remington K., Saunders R.D.C., Scheeler F.,
RA   Shen H., Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.J.,
RA   Spier E., Spradling A.C., Stapleton M., Strong R., Sun E., Svirskas R.,
RA   Tector C., Turner R., Venter E., Wang A.H., Wang X., Wang Z.-Y.,
RA   Wassarman D.A., Weinstock G.M., Weissenbach J., Williams S.M., Woodage T.,
RA   Worley K.C., Wu D., Yang S., Yao Q.A., Ye J., Yeh R.-F., Zaveri J.S.,
RA   Zhan M., Zhang G., Zhao Q., Zheng L., Zheng X.H., Zhong F.N., Zhong W.,
RA   Zhou X., Zhu S.C., Zhu X., Smith H.O., Gibbs R.A., Myers E.W., Rubin G.M.,
RA   Venter J.C.;
RT   "The genome sequence of Drosophila melanogaster.";
RL   Science 287:2185-2195(2000).
RN   [3]
RP   GENOME REANNOTATION, AND ALTERNATIVE SPLICING (ISOFORMS AND B).
RC   STRAIN=Berkeley;
RX   PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
RA   Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
RA   Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
RA   Smith C.D., Tupy J.L., Whitfield E.J., Bayraktaroglu L., Berman B.P.,
RA   Bettencourt B.R., Celniker S.E., de Grey A.D.N.J., Drysdale R.A.,
RA   Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q., Stapleton M.,
RA   Yamada C., Ashburner M., Gelbart W.M., Rubin G.M., Lewis S.E.;
RT   "Annotation of the Drosophila melanogaster euchromatic genome: a systematic
RT   review.";
RL   Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 782-2046 (ISOFORM A).
RC   STRAIN=Berkeley; TISSUE=Embryo;
RX   PubMed=12537569; DOI=10.1186/gb-2002-3-12-research0080;
RA   Stapleton M., Carlson J.W., Brokstein P., Yu C., Champe M., George R.A.,
RA   Guarin H., Kronmiller B., Pacleb J.M., Park S., Wan K.H., Rubin G.M.,
RA   Celniker S.E.;
RT   "A Drosophila full-length cDNA resource.";
RL   Genome Biol. 3:RESEARCH0080.1-RESEARCH0080.8(2002).
RN   [5]
RP   FUNCTION, AND IDENTIFICATION IN THE TIP60 COMPLEX.
RX   PubMed=15528408; DOI=10.1126/science.1103455;
RA   Kusch T., Florens L., Macdonald W.H., Swanson S.K., Glaser R.L.,
RA   Yates J.R. III, Abmayr S.M., Washburn M.P., Workman J.L.;
RT   "Acetylation by Tip60 is required for selective histone variant exchange at
RT   DNA lesions.";
RL   Science 306:2084-2087(2004).
RN   [6]
RP   FUNCTION.
RX   PubMed=16024792; DOI=10.1128/mcb.25.15.6559-6569.2005;
RA   Eissenberg J.C., Wong M., Chrivia J.C.;
RT   "Human SRCAP and Drosophila melanogaster DOM are homologs that function in
RT   the notch signaling pathway.";
RL   Mol. Cell. Biol. 25:6559-6569(2005).
RN   [7]
RP   FUNCTION, AND TISSUE SPECIFICITY.
RX   PubMed=16322456; DOI=10.1126/science.1120140;
RA   Xi R., Xie T.;
RT   "Stem cell self-renewal controlled by chromatin remodeling factors.";
RL   Science 310:1487-1489(2005).
RN   [8]
RP   FUNCTION.
RX   PubMed=16508010; DOI=10.1128/mcb.26.6.2347-2359.2006;
RA   Gause M., Eissenberg J.C., Macrae A.F., Dorsett M., Misulovin Z.,
RA   Dorsett D.;
RT   "Nipped-A, the Tra1/TRRAP subunit of the Drosophila SAGA and Tip60
RT   complexes, has multiple roles in Notch signaling during wing development.";
RL   Mol. Cell. Biol. 26:2347-2359(2006).
RN   [9]
RP   FUNCTION.
RX   PubMed=17517653; DOI=10.1073/pnas.0610279104;
RA   Lu J., Ruhf M.-L., Perrimon N., Leder P.;
RT   "A genome-wide RNA interference screen identifies putative chromatin
RT   regulators essential for E2F repression.";
RL   Proc. Natl. Acad. Sci. U.S.A. 104:9381-9386(2007).
RN   [10]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-656; SER-664; SER-666;
RP   THR-729; SER-733; SER-736; SER-744 AND THR-838, AND IDENTIFICATION BY MASS
RP   SPECTROMETRY.
RC   TISSUE=Embryo;
RX   PubMed=18327897; DOI=10.1021/pr700696a;
RA   Zhai B., Villen J., Beausoleil S.A., Mintseris J., Gygi S.P.;
RT   "Phosphoproteome analysis of Drosophila melanogaster embryos.";
RL   J. Proteome Res. 7:1675-1682(2008).
CC   -!- FUNCTION: Mediates the ATP-dependent exchange of unmodified histone
CC       H2AV for its phosphorylated and acetylated form H2AVK5acS138ph, leading
CC       to transcriptional regulation of selected genes by chromatin
CC       remodeling. Involved in Notch signaling. Represses E2F target genes.
CC       Required for somatic stem cell self-renewal but not for germline stem
CC       cell self-renewal. Involved in oogenesis. {ECO:0000269|PubMed:11262242,
CC       ECO:0000269|PubMed:15528408, ECO:0000269|PubMed:16024792,
CC       ECO:0000269|PubMed:16322456, ECO:0000269|PubMed:16508010,
CC       ECO:0000269|PubMed:17517653}.
CC   -!- SUBUNIT: Component of the Tip60 chromatin-remodeling complex which
CC       contains Domino, Tip60, Tra1, Brd8, E(Pc), DMAP1, Pontin, Reptin, Ing3,
CC       Act87E, BAP55, Mrg15, MrgBP, Gas41 and YL-1.
CC       {ECO:0000269|PubMed:15528408}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00549,
CC       ECO:0000269|PubMed:11262242}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=A;
CC         IsoId=Q9NDJ2-1; Sequence=Displayed;
CC       Name=B;
CC         IsoId=Q9NDJ2-2; Sequence=VSP_029443;
CC   -!- TISSUE SPECIFICITY: Isoform B is present at high levels in ovary, in
CC       follicle cells, nurse cells and oocyte. Isoform B is also present in
CC       germline and somatic stem cells from the germarium. Isoform A is
CC       undetectable in adult ovary (at protein level).
CC       {ECO:0000269|PubMed:11262242, ECO:0000269|PubMed:16322456}.
CC   -!- DEVELOPMENTAL STAGE: Isoform A and isoform B are present in 0-12 hours
CC       embryonic extracts. During embryonic development, isoform A expression
CC       is restricted to the developing nervous system, whereas isoform B is
CC       ubiquitously expressed. During postembryonic development, isoform B is
CC       found in brain, imaginal disks, lymph glands and salivary glands and
CC       isoform A is found in some brain regions, photoreceptor cells and
CC       sensory organ precursors (at protein level).
CC       {ECO:0000269|PubMed:11262242}.
CC   -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. SWR1 subfamily.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAL13882.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AF076776; AAF82185.1; -; mRNA.
DR   EMBL; AF254373; AAK53539.1; -; mRNA.
DR   EMBL; AE013599; AAM70871.1; -; Genomic_DNA.
DR   EMBL; AE013599; AAM70872.2; -; Genomic_DNA.
DR   EMBL; AY058653; AAL13882.1; ALT_INIT; mRNA.
DR   RefSeq; NP_524833.2; NM_080094.4. [Q9NDJ2-1]
DR   RefSeq; NP_788424.1; NM_176244.3. [Q9NDJ2-2]
DR   SMR; Q9NDJ2; -.
DR   BioGRID; 69802; 98.
DR   DIP; DIP-60953N; -.
DR   IntAct; Q9NDJ2; 8.
DR   STRING; 7227.FBpp0071529; -.
DR   iPTMnet; Q9NDJ2; -.
DR   PaxDb; Q9NDJ2; -.
DR   PRIDE; Q9NDJ2; -.
DR   EnsemblMetazoa; FBtr0071603; FBpp0071529; FBgn0020306. [Q9NDJ2-1]
DR   EnsemblMetazoa; FBtr0071604; FBpp0071530; FBgn0020306. [Q9NDJ2-2]
DR   GeneID; 45655; -.
DR   KEGG; dme:Dmel_CG9696; -.
DR   UCSC; CG9696-RA; d. melanogaster. [Q9NDJ2-1]
DR   CTD; 45655; -.
DR   FlyBase; FBgn0020306; dom.
DR   VEuPathDB; VectorBase:FBgn0020306; -.
DR   eggNOG; KOG0391; Eukaryota.
DR   GeneTree; ENSGT00940000167340; -.
DR   InParanoid; Q9NDJ2; -.
DR   PhylomeDB; Q9NDJ2; -.
DR   SignaLink; Q9NDJ2; -.
DR   BioGRID-ORCS; 45655; 0 hits in 3 CRISPR screens.
DR   ChiTaRS; jumu; fly.
DR   GenomeRNAi; 45655; -.
DR   PRO; PR:Q9NDJ2; -.
DR   Proteomes; UP000000803; Chromosome 2R.
DR   Bgee; FBgn0020306; Expressed in egg cell and 27 other tissues.
DR   ExpressionAtlas; Q9NDJ2; baseline and differential.
DR   Genevisible; Q9NDJ2; DM.
DR   GO; GO:0000123; C:histone acetyltransferase complex; IPI:FlyBase.
DR   GO; GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:FlyBase.
DR   GO; GO:0005634; C:nucleus; IDA:FlyBase.
DR   GO; GO:0000812; C:Swr1 complex; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IBA:GO_Central.
DR   GO; GO:0008094; F:ATP-dependent activity, acting on DNA; ISS:FlyBase.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0006325; P:chromatin organization; IMP:FlyBase.
DR   GO; GO:0070983; P:dendrite guidance; IMP:FlyBase.
DR   GO; GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.
DR   GO; GO:0030097; P:hemopoiesis; TAS:FlyBase.
DR   GO; GO:0016573; P:histone acetylation; IDA:UniProtKB.
DR   GO; GO:0043486; P:histone exchange; IDA:UniProtKB.
DR   GO; GO:0036098; P:male germ-line stem cell population maintenance; IMP:FlyBase.
DR   GO; GO:0010629; P:negative regulation of gene expression; IMP:FlyBase.
DR   GO; GO:0035207; P:negative regulation of hemocyte proliferation; TAS:FlyBase.
DR   GO; GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
DR   GO; GO:0000381; P:regulation of alternative mRNA splicing, via spliceosome; HMP:FlyBase.
DR   GO; GO:0006355; P:regulation of transcription, DNA-templated; IMP:FlyBase.
DR   GO; GO:0035019; P:somatic stem cell population maintenance; IMP:FlyBase.
DR   GO; GO:0035222; P:wing disc pattern formation; IGI:FlyBase.
DR   Gene3D; 3.40.50.10810; -; 1.
DR   Gene3D; 3.40.50.300; -; 1.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR014012; HSA_dom.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR001005; SANT/Myb.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR000330; SNF2_N.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF07529; HSA; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SMART; SM00573; HSA; 1.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
DR   PROSITE; PS51204; HSA; 1.
DR   PROSITE; PS50090; MYB_LIKE; 1.
PE   1: Evidence at protein level;
KW   Alternative splicing; ATP-binding; Cell cycle; Chromatin regulator;
KW   Coiled coil; Developmental protein; Differentiation; DNA-binding; Helicase;
KW   Hydrolase; Nucleotide-binding; Nucleus; Oogenesis; Phosphoprotein;
KW   Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..3198
FT                   /note="Helicase domino"
FT                   /id="PRO_0000311238"
FT   DOMAIN          507..579
FT                   /note="HSA"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00549"
FT   DOMAIN          926..1091
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   DOMAIN          1662..1812
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00542"
FT   DOMAIN          2136..2205
FT                   /note="Myb-like"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00133"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          93..112
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          119..148
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          256..350
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          391..474
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          635..848
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1471..1492
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1828..1856
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2061..2100
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          2318..2362
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          187..212
FT                   /evidence="ECO:0000255"
FT   COILED          666..696
FT                   /evidence="ECO:0000255"
FT   COILED          741..784
FT                   /evidence="ECO:0000255"
FT   COILED          1951..1996
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        258..285
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        293..350
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        391..436
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        450..474
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        635..650
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        662..676
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        677..699
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        711..731
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        745..771
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        789..807
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        808..846
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1828..1845
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2061..2090
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        2322..2348
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         939..946
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00541"
FT   MOD_RES         656
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         664
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         666
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         729
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         733
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         736
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         744
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   MOD_RES         838
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000269|PubMed:18327897"
FT   VAR_SEQ         2009..3198
FT                   /note="WISRNTMEQMPMWCPPTPPQDNDNDIYIDYSLSFMYELEPIAETDLPPVYVR
FT                   KEHKRSRTDAGYDGSRRPNKMRREDNYVPPRSLFDRPTPQLARLRRELKSQRFRGSFKP
FT                   NMPIPGLKPQLPTKPLTEPEAMAEWCVFEDMAILHVLVNLQGLPCSLMLLSPGQTPNWD
FT                   LVSEMVNFCSKTYRSARQCRWRYETHIQPREEGKVVESPKKQKKLKPTLRTEYLKSPLR
FT                   YLRTTQLYVSDNNASFYKTMRSRFDSIKTAYLKKAPPPKRQFSAPSLMNPKHMEVLQEF
FT                   GILNYDQPVSPQNIAAMKANKIREKQRGQQMSQPPVGVGVVQQMQQQSQQQQQPAPPPL
FT                   PQQQQPQQVVQQVQQQQQQQQQQQQQQVVQQQLPTVSNVQQTLPVQQTVELVQQQPTTT
FT                   TTVAVPAAGGQLQQLQIQHLTSSNVSPGQQTAILLHQPQQQLRTHPGQGGQSNTQQLVK
FT                   TIVGTSSSLTAGQLQQLAQQSAVASGGQSSVSVVLTTPVQTLPSVVQPQIGSGAQIVSI
FT                   SSQTLPVNSSPQLGSIVQTQSLPQVVSVSTLPTVGTVLTTTANQPQQQHQTTAVTTLNT
FT                   TMLRGQRIVSTAAGNTLQQRTTAGGQSIVSMPNLGQGASPSQFQTQLRLAAVPTSPATQ
FT                   TTQLVTTKGIPVSALQQGGKTTVIPVTQQSGGAHIQLYRQRSLKVLQTTTQAVPSGSAG
FT                   ATGATANLVQAGGTIIQASNMATHVTSQKVAVSGMPGTSTTVQAGNVVSSVQMHGQART
FT                   QFIKQMAAGKQQLQRQVVSADGTTTTTAAGDMLLVKRHNILAAQKAQQASGALFTTTTG
FT                   QQQQQQQQQGQLPVAGQPQQVTQHQIASLVKASTAAAASGSSVNAGGVTVSATNPTVQA
FT                   GSVNMTLPQLKPGSQIKVTMPNQMRHLQMQQQLTMPRKISRMTQLVSASGQPTATNIIT
FT                   TTGPQQQQQGVTVSGGGTLPTVASQQQQQQHQQKVGGGNSVQAQLLHIQNTKGLSNSVT
FT                   MQQIQQVMRSGQQGTLATTNLVLGKTSVGRVIPVSVASQANQRQTIQVVSAASAQALAA
FT                   GNLRTHVAGPSIASTLKVAAPGSAGGQTTQQTLIAALQHNQRQNASPVRLQTTAGGNLL
FT                   AVVQQQQQQQHTSIAGPTAGPAEVMTITQTTTTLPTVGSLQQQQQQQQQQGGISQPTTQ
FT                   QVRKLVQKKILIRSEKE -> NTKTDSNSNKRRLVRENRRNSAQKLSRSVSSHSTGSNN
FT                   KNSKSATTRGNSQNSLNQTVPVGSGISRVNRTGAGVSSSSRGKSNSTKSTGKGTDAAPQ
FT                   VRRQTRLHSLGAVNMASARTPPTRKTTRTALAASAAASTLEDASLIVEERPKRQSANIA
FT                   MSKMMKTPFKQNVPSNISIKTTPPKRGRRDSVAAAATRSKLLERRATIAAPLKHMDDES
FT                   DQDEEEQEEQESEEDTEGEEANATVDDDEEGEEELASLDEETIQTGSQTNDEEDDDEEE
FT                   VGEEGMVDIDTEDSEADVKSSSTYGTAADGKPEEAESLDGWDAHDQVQDTTMTSSTYYN
FT                   VSEESDTDEHHDSKAEAKEPPQNSDKSDESEAVGHTPRTRSRGTVKINLWTLDVSPVAN
FT                   ALNKSSANRSLKKAPRTESTPKESQSEPRRKITQPKLPKKEETNNKSNSNIGTLHRWIS
FT                   KSPRVMLRSTPVTAASASSSAAVSGVSGGNASSSGTAR (in isoform B)"
FT                   /evidence="ECO:0000303|PubMed:11262242"
FT                   /id="VSP_029443"
FT   CONFLICT        1598
FT                   /note="V -> G (in Ref. 1; AAF82185/AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1611..1612
FT                   /note="SS -> LL (in Ref. 1; AAF82185/AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1619
FT                   /note="Q -> P (in Ref. 1; AAF82185/AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1631
FT                   /note="P -> A (in Ref. 1; AAF82185/AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2157
FT                   /note="V -> G (in Ref. 1; AAF82185)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2198
FT                   /note="R -> P (in Ref. 1; AAF82185)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2340
FT                   /note="M -> MQQQSQQ (in Ref. 1; AAF82185)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2369..2371
FT                   /note="Missing (in Ref. 1; AAF82185)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        2514
FT                   /note="T -> S (in Ref. 1; AAF82185)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2127
FT                   /note="P -> A (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2174
FT                   /note="K -> N (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2180
FT                   /note="N -> T (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2222
FT                   /note="E -> D (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2229
FT                   /note="E -> D (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2287
FT                   /note="G -> E (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2471
FT                   /note="V -> G (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        Q9NDJ2-2:2474
FT                   /note="A -> T (in Ref. 1; AAK53539)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   3198 AA;  350239 MW;  E65C3E86E1E64AB7 CRC64;
     MNEGNSAGGG HEGLSPAPPA VPDRVTPHST EISVAPANST STTVRAAGSV GAALPATRHH
     QHIATQVKGI ASSSSKQQKQ LASAQLPVPL SPLPQQQQQT AEATAAAAAP AHSNVSVSSS
     TIEASVLPPQ AKRQRLDDNE DRTSAASIVG PAESSNIVSS LLPASVASSS EVGGLSSTAL
     QDLNALKKRI LQQKLQILRN LKERHLENVS EYFYLQNGGS MMDYPAWRKK TPTPQFISYS
     NANRIDQLIH EDKPSTSAAA AAAQNQKYTT QQTDSVESSL VSGIGTGATK GAPLDGNISN
     STVKTNTQSQ VPSKIGSFTE STPAATESNS STTVPGTATS GAATSTSATS AEASGNVLAV
     EAEIKIPAVG ATPVAISTKL PAAVVQLTQQ GGTPLLPCNT SAGSTALRRP QGQNNASSGS
     AAASGGGGSL TPTPLYTGNG PAALGGSGGL TPGTPTSGSL LSPALGGGSG TPNSAAQEFS
     FKAKQEVYVM QRISELQREG LWTERRLPKL QEPSRPKAHW DYLLEEMVWL AADFAQERKW
     KKNAAKKCAK MVQKYFQDKA TAAQRAEKAQ ELQLKRVASF IAREVKSFWS NVEKLVEYKH
     QTKIEEKRKQ ALDQHLSFIV DQTEKFSQQL VEGMNKSVAD TPSLNSSRLT SPKRESDDDF
     RPESGSEDDE ETIAKAEEDA ADVKEEVTAL AKESEMDFDD FLNDLPPGYL ENRDKLMKEE
     QSSAIKTETP DDSDDSEFEA KEASDDDENT ISKQEEAEQE IDHKKEIDEL EADNDLSVEQ
     LLAKYKSEQP PSPKRRKLAP RDPELDSDDD STAVDSTEES EDAATEDEED LSTVKTDTDM
     EEQDEQEDGL KSLMADADAT SGAAGSGSTA GASGNKDDML NDAAALAESL QPKGNTLSST
     NVVTPVPFLL KHSLREYQHI GLDWLVTMNE RKLNGILADE MGLGKTIQTI ALLAHLACAK
     GNWGPHLIVV PSSVMLNWEM EFKKWCPGFK ILTYYGSQKE RKLKRVGWTK PNAFHVCITS
     YKLVVQDQQS FRRKKWKYLI LDEAQNIKNF KSQRWQLLLN FSTERRLLLT GTPLQNDLME
     LWSLMHFLMP YVFSSHREFK EWFSNPMTGM IEGNMEYNET LITRLHKVIR PFLLRRLKKE
     VEKQMPKKYE HVITCRLSNR QRYLYEDFMS RAKTRETLQT GNLLSVINVL MQLRKVCNHP
     NMFEARPTIS PFQMDGITFH TPRLVCDIME YDPFTQINLE TLNLLLLHLE QTMTAYVSHK
     SRLLAPPRKL IEDIDTAPLP APRCPNGKYR FHIRVRSAEL AQRIKLNAVK VGASPAMRLE
     GSKIMPMRNL LPSGRVLKRV SASINPVNMA LKPVVINSVV TTTSSSTTAS SPTGALSVLS
     NSKLLGARSQ INAPTPAKVA KTMQDGKPFF YLTPATNSGA AGARLTLTSK TTASASTTTS
     RTTVTASTTS GQQLIRDPIV KDLATHVKST VQKQSIANGK TEPEEETEAE DPYKVQELIQ
     MRKEQRLAAL KRMAMINRRR TDATPIYGED CREAIQRCMQ ATRSLKRSTW QTRGYANCCT
     AMAHRNGWSL NHLLKSFEER CADLKPVFAN FVIYVPSVCA PRIRRYVQNL SSTHWQHEQR
     IENIVDQALR PKLALLHPII SEMTTKFPDP RLIQYDCGKL QTMDRLLRQL KVNGHRVLIF
     TQMTKMLDVL EAFLNYHGHI YLRLDGSTRV EQRQILMERF NGDKRIFCFI LSTRSGGVGI
     NLTGADTVIF YDSDWNPTMD AQAQDRCHRI GQTRDVHIYR LVSERTIEVN ILKKANQKRM
     LSDMAIEGGN FTTTYFKSST IKDLFTMEQS EQDESSQEKS ENKDRIVATT TLSDTPSTVV
     ETEKQSLRAF EHALAAAEDE QDVQATKTAK AEVAADLAEF DENIPIATED PNAEGGPQVE
     LSKADLEMQN LVKQLSPIER YAMRFVEETG AAWTAEQLRA AEAELEAQKR EWEANRLAAM
     HKEEELLKQE TEAEEMLTYS RKDSSNQVWI SRNTMEQMPM WCPPTPPQDN DNDIYIDYSL
     SFMYELEPIA ETDLPPVYVR KEHKRSRTDA GYDGSRRPNK MRREDNYVPP RSLFDRPTPQ
     LARLRRELKS QRFRGSFKPN MPIPGLKPQL PTKPLTEPEA MAEWCVFEDM AILHVLVNLQ
     GLPCSLMLLS PGQTPNWDLV SEMVNFCSKT YRSARQCRWR YETHIQPREE GKVVESPKKQ
     KKLKPTLRTE YLKSPLRYLR TTQLYVSDNN ASFYKTMRSR FDSIKTAYLK KAPPPKRQFS
     APSLMNPKHM EVLQEFGILN YDQPVSPQNI AAMKANKIRE KQRGQQMSQP PVGVGVVQQM
     QQQSQQQQQP APPPLPQQQQ PQQVVQQVQQ QQQQQQQQQQ QQVVQQQLPT VSNVQQTLPV
     QQTVELVQQQ PTTTTTVAVP AAGGQLQQLQ IQHLTSSNVS PGQQTAILLH QPQQQLRTHP
     GQGGQSNTQQ LVKTIVGTSS SLTAGQLQQL AQQSAVASGG QSSVSVVLTT PVQTLPSVVQ
     PQIGSGAQIV SISSQTLPVN SSPQLGSIVQ TQSLPQVVSV STLPTVGTVL TTTANQPQQQ
     HQTTAVTTLN TTMLRGQRIV STAAGNTLQQ RTTAGGQSIV SMPNLGQGAS PSQFQTQLRL
     AAVPTSPATQ TTQLVTTKGI PVSALQQGGK TTVIPVTQQS GGAHIQLYRQ RSLKVLQTTT
     QAVPSGSAGA TGATANLVQA GGTIIQASNM ATHVTSQKVA VSGMPGTSTT VQAGNVVSSV
     QMHGQARTQF IKQMAAGKQQ LQRQVVSADG TTTTTAAGDM LLVKRHNILA AQKAQQASGA
     LFTTTTGQQQ QQQQQQGQLP VAGQPQQVTQ HQIASLVKAS TAAAASGSSV NAGGVTVSAT
     NPTVQAGSVN MTLPQLKPGS QIKVTMPNQM RHLQMQQQLT MPRKISRMTQ LVSASGQPTA
     TNIITTTGPQ QQQQGVTVSG GGTLPTVASQ QQQQQHQQKV GGGNSVQAQL LHIQNTKGLS
     NSVTMQQIQQ VMRSGQQGTL ATTNLVLGKT SVGRVIPVSV ASQANQRQTI QVVSAASAQA
     LAAGNLRTHV AGPSIASTLK VAAPGSAGGQ TTQQTLIAAL QHNQRQNASP VRLQTTAGGN
     LLAVVQQQQQ QQHTSIAGPT AGPAEVMTIT QTTTTLPTVG SLQQQQQQQQ QQGGISQPTT
     QQVRKLVQKK ILIRSEKE
 
 
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