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DOSC_SHIBS
ID   DOSC_SHIBS              Reviewed;         460 AA.
AC   Q320T0; Q320S9;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   15-JAN-2008, sequence version 2.
DT   03-AUG-2022, entry version 85.
DE   RecName: Full=Diguanylate cyclase DosC;
DE            Short=DGC;
DE            EC=2.7.7.65;
DE   AltName: Full=Direct oxygen-sensing cyclase;
GN   Name=dosC; OrderedLocusNames=SBO_1566/SBO_1567;
OS   Shigella boydii serotype 4 (strain Sb227).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Shigella.
OX   NCBI_TaxID=300268;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Sb227;
RX   PubMed=16275786; DOI=10.1093/nar/gki954;
RA   Yang F., Yang J., Zhang X., Chen L., Jiang Y., Yan Y., Tang X., Wang J.,
RA   Xiong Z., Dong J., Xue Y., Zhu Y., Xu X., Sun L., Chen S., Nie H., Peng J.,
RA   Xu J., Wang Y., Yuan Z., Wen Y., Yao Z., Shen Y., Qiang B., Hou Y., Yu J.,
RA   Jin Q.;
RT   "Genome dynamics and diversity of Shigella species, the etiologic agents of
RT   bacillary dysentery.";
RL   Nucleic Acids Res. 33:6445-6458(2005).
CC   -!- FUNCTION: Globin-coupled heme-based oxygen sensor protein displaying
CC       diguanylate cyclase (DGC) activity in response to oxygen availability.
CC       Thus, catalyzes the synthesis of cyclic diguanylate (c-di-GMP) via the
CC       condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger
CC       which controls cell surface-associated traits in bacteria (By
CC       similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=2 GTP = cyclic di-3',5'-guanylate + 2 diphosphate;
CC         Xref=Rhea:RHEA:24898, ChEBI:CHEBI:33019, ChEBI:CHEBI:37565,
CC         ChEBI:CHEBI:58805; EC=2.7.7.65;
CC   -!- COFACTOR:
CC       Name=heme; Xref=ChEBI:CHEBI:30413; Evidence={ECO:0000250};
CC       Note=Binds 1 heme group per subunit. {ECO:0000250};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC       Note=Binds 1 Mg(2+) ion per subunit. {ECO:0000250};
CC   -!- PATHWAY: Purine metabolism; 3',5'-cyclic di-GMP biosynthesis.
CC   -!- DOMAIN: Is composed of an N-terminal sensory globin-fold domain that
CC       binds heme and oxygen, and a C-terminal GGDEF diguanylate cyclase
CC       domain. {ECO:0000250}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=ABB66178.1; Type=Frameshift; Evidence={ECO:0000305};
CC       Sequence=ABB66179.1; Type=Frameshift; Evidence={ECO:0000305};
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DR   EMBL; CP000036; ABB66178.1; ALT_FRAME; Genomic_DNA.
DR   EMBL; CP000036; ABB66179.1; ALT_FRAME; Genomic_DNA.
DR   AlphaFoldDB; Q320T0; -.
DR   SMR; Q320T0; -.
DR   EnsemblBacteria; ABB66178; ABB66178; SBO_1566.
DR   EnsemblBacteria; ABB66179; ABB66179; SBO_1567.
DR   KEGG; sbo:SBO_1566; -.
DR   KEGG; sbo:SBO_1567; -.
DR   HOGENOM; CLU_1155769_0_0_6; -.
DR   UniPathway; UPA00599; -.
DR   Proteomes; UP000007067; Chromosome.
DR   GO; GO:0052621; F:diguanylate cyclase activity; IEA:UniProtKB-EC.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0019825; F:oxygen binding; IEA:InterPro.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd14757; GS_EcDosC-like_GGDEF; 1.
DR   Gene3D; 1.10.490.10; -; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   InterPro; IPR039435; DosC_GS.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR009050; Globin-like_sf.
DR   InterPro; IPR044398; Globin-sensor_dom.
DR   InterPro; IPR012292; Globin/Proto.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF11563; Protoglobin; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF46458; SSF46458; 1.
DR   SUPFAM; SSF55073; SSF55073; 1.
DR   TIGRFAMs; TIGR00254; GGDEF; 1.
DR   PROSITE; PS50887; GGDEF; 1.
PE   3: Inferred from homology;
KW   GTP-binding; Heme; Iron; Magnesium; Metal-binding; Nucleotide-binding;
KW   Transferase.
FT   CHAIN           1..460
FT                   /note="Diguanylate cyclase DosC"
FT                   /id="PRO_0000316154"
FT   DOMAIN          325..458
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00095"
FT   ACT_SITE        376
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255"
FT   BINDING         98
FT                   /ligand="heme"
FT                   /ligand_id="ChEBI:CHEBI:30413"
FT                   /ligand_part="Fe"
FT                   /ligand_part_id="ChEBI:CHEBI:18248"
FT                   /note="proximal binding residue"
FT                   /evidence="ECO:0000250"
FT   BINDING         333
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000250"
FT   BINDING         341
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250"
FT   BINDING         350
FT                   /ligand="substrate"
FT                   /evidence="ECO:0000250"
FT   BINDING         376
FT                   /ligand="Mg(2+)"
FT                   /ligand_id="ChEBI:CHEBI:18420"
FT                   /evidence="ECO:0000250"
FT   SITE            43
FT                   /note="Involved in oxygen binding and important for the
FT                   stability of the Fe(II)-O(2) complex"
FT                   /evidence="ECO:0000250"
FT   SITE            60
FT                   /note="Important for oxygen binding and stability of the
FT                   Fe(II)-O(2) complex"
FT                   /evidence="ECO:0000250"
FT   SITE            65
FT                   /note="Critical for restricting water access to the heme
FT                   distal side to avoid rapid autoxidation"
FT                   /evidence="ECO:0000250"
FT   SITE            338
FT                   /note="Transition state stabilizer"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   460 AA;  53194 MW;  7A34AA1B3E5E24DF CRC64;
     MEMYFKRMKD EWTGLVEQAD PLIRAKAAEI AVAHAHYLSI EFYRIVRIDP HAEEFLSNEQ
     VERQLKSAME RWIINVLSAQ VDDVERLIQI QHTVAEVHAR IGIPVEIVEM GFRVLKKILY
     PVIFSSDYSA AEKLQVYHFS INSIDIAMEV MTRAFTFSDS SASKEDENYR IFSLLENAEE
     EKERQIASIL SWEIDIIYKI LLDSDLGSSL PLSQADFGLW FNHKGRHYFS GIAEVGHISR
     LIQDFDGIFN QTMRNTRNLN NRSLRVKFLL QIRNTVSQII TLLRELFEEV SRHEVGMDVL
     TKLLNRRFLP TIFKREIAHA NRTGTPLSVL IIDVDKFKEI NDTWGHNTGD EILRKVSQAF
     YDNVRSSDYV FRYGGDEFII VLTEASENET LRTAERIRSR VEKTKLKAAN GEDIALSLSI
     GAAMFNGHPD YERLIQIADE ALYIAKRRGR NRVELWKASL
 
 
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