DPB4_YARLI
ID DPB4_YARLI Reviewed; 163 AA.
AC Q6CHS6;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=DNA polymerase epsilon subunit D;
DE AltName: Full=DNA polymerase II subunit D;
GN Name=DPB4; OrderedLocusNames=YALI0A05401g;
OS Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Dipodascaceae; Yarrowia.
OX NCBI_TaxID=284591;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CLIB 122 / E 150;
RX PubMed=15229592; DOI=10.1038/nature02579;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F.,
RA Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M.,
RA Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M.,
RA Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C.,
RA Weissenbach J., Wincker P., Souciet J.-L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- FUNCTION: As accessory component of the DNA polymerase epsilon (DNA
CC polymerase II) participates in chromosomal DNA replication.
CC {ECO:0000250|UniProtKB:Q04603}.
CC -!- SUBUNIT: Heterotetramer. Consists of four subunits: POL2, DPB2, DPB3
CC and DPB4 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- MISCELLANEOUS: In eukaryotes there are five DNA polymerases: alpha,
CC beta, gamma, delta, and epsilon which are responsible for different
CC reactions of DNA synthesis.
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DR EMBL; CR382127; CAG83710.1; -; Genomic_DNA.
DR RefSeq; XP_499785.1; XM_499785.1.
DR AlphaFoldDB; Q6CHS6; -.
DR SMR; Q6CHS6; -.
DR STRING; 4952.CAG83710; -.
DR EnsemblFungi; CAG83710; CAG83710; YALI0_A05401g.
DR GeneID; 2905945; -.
DR KEGG; yli:YALI0A05401g; -.
DR VEuPathDB; FungiDB:YALI0_A05401g; -.
DR HOGENOM; CLU_066247_7_4_1; -.
DR InParanoid; Q6CHS6; -.
DR OMA; ALDHIGH; -.
DR Proteomes; UP000001300; Chromosome A.
DR GO; GO:0008623; C:CHRAC; IBA:GO_Central.
DR GO; GO:0008622; C:epsilon DNA polymerase complex; IBA:GO_Central.
DR GO; GO:0031490; F:chromatin DNA binding; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IBA:GO_Central.
DR GO; GO:0031507; P:heterochromatin assembly; IBA:GO_Central.
DR GO; GO:0006272; P:leading strand elongation; IBA:GO_Central.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR003958; CBFA_NFYB_domain.
DR InterPro; IPR009072; Histone-fold.
DR Pfam; PF00808; CBFD_NFYB_HMF; 1.
DR SUPFAM; SSF47113; SSF47113; 1.
PE 3: Inferred from homology;
KW DNA replication; Nucleus; Reference proteome.
FT CHAIN 1..163
FT /note="DNA polymerase epsilon subunit D"
FT /id="PRO_0000191753"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 126..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 163 AA; 17920 MW; BF83881277302399 CRC64;
MPPKGHKKTA DGDFRPVNSA GNTIQAKQKY SIDDLLYPKS TIKNLAKETL PDDAIISKDA
LTAIQRAATL FVSYMASHGN ASAEAGGRKK ITPQDVFVAL KDVDLAQFVP SVTQSVNEFE
QEVAQRKKDK VVRAQDDQDH ISSSESETEA TEEEGNKRIR TDE