DPGA_STRTO
ID DPGA_STRTO Reviewed; 390 AA.
AC Q8KLK5;
DT 17-FEB-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 25-MAY-2022, entry version 63.
DE RecName: Full=3,5-dihydroxyphenylacetyl-CoA synthase {ECO:0000303|PubMed:22492619};
DE EC=2.3.1.246 {ECO:0000269|PubMed:22492619};
DE AltName: Full=3,5-dihydroxyphenylacetyl-CoA synthase polyketide synthase type III {ECO:0000305};
OS Streptomyces toyocaensis.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=55952;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=NRRL 15009;
RX PubMed=9177243; DOI=10.1073/pnas.94.12.6480;
RA Marshall C.G., Broadhead G., Leskiw B.K., Wright G.D.;
RT "D-Ala-D-Ala ligases from glycopeptide antibiotic-producing organisms are
RT highly homologous to the enterococcal vancomycin-resistance ligases VanA
RT and VanB.";
RL Proc. Natl. Acad. Sci. U.S.A. 94:6480-6483(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=NRRL 15009;
RX PubMed=12060705; DOI=10.1073/pnas.102285099;
RA Pootoolal J., Thomas M.G., Marshall C.G., Neu J.M., Hubbard B.K.,
RA Walsh C.T., Wright G.D.;
RT "Assembling the glycopeptide antibiotic scaffold: the biosynthesis of
RT A47934 from Streptomyces toyocaensis NRRL15009.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:8962-8967(2002).
RN [3]
RP FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=22492619; DOI=10.1002/cbic.201200051;
RA Wu H.C., Li Y.S., Liu Y.C., Lyu S.Y., Wu C.J., Li T.L.;
RT "Chain elongation and cyclization in type III PKS DpgA.";
RL ChemBioChem 13:862-871(2012).
CC -!- FUNCTION: Involved in the biosynthesis of the nonproteinogenic amino
CC acid monomer (S)-3,5-dihydroxyphenylglycine (Dpg) responsible of the
CC production of vancomycin and teicoplanin antibiotics. Catalyzes the
CC Claisen condensation of four molecules of malonyl-CoA to yield 3,5-
CC dihydroxyphenylacetyl-CoA (DPA-CoA) and three free coenzyme A (CoA).
CC DpgA requires the presence of the dehydratases DpgB and DpgD to
CC facilitate the aromatization of the DPA-S-DgpA or DPA-S-CoA
CC intermediate. {ECO:0000269|PubMed:22492619}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=4 H(+) + 4 malonyl-CoA = (3,5-dihydroxyphenyl)acetyl-CoA + 4
CC CO2 + 3 CoA + H2O; Xref=Rhea:RHEA:44744, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:57287,
CC ChEBI:CHEBI:57384, ChEBI:CHEBI:84554; EC=2.3.1.246;
CC Evidence={ECO:0000269|PubMed:22492619};
CC -!- PATHWAY: Antibiotic biosynthesis; vancomycin biosynthesis.
CC {ECO:0000305|PubMed:22492619}.
CC -!- SIMILARITY: Belongs to the thiolase-like superfamily. Chalcone/stilbene
CC synthases family. {ECO:0000305}.
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DR EMBL; U82965; AAM80548.1; -; Genomic_DNA.
DR AlphaFoldDB; Q8KLK5; -.
DR SMR; Q8KLK5; -.
DR STRING; 55952.BU52_01210; -.
DR eggNOG; COG3424; Bacteria.
DR UniPathway; UPA00162; -.
DR GO; GO:0016747; F:acyltransferase activity, transferring groups other than amino-acyl groups; IDA:UniProtKB.
DR GO; GO:0033072; P:vancomycin biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.40.47.10; -; 2.
DR InterPro; IPR012328; Chalcone/stilbene_synt_C.
DR InterPro; IPR001099; Chalcone/stilbene_synt_N.
DR InterPro; IPR011141; Polyketide_synthase_type-III.
DR InterPro; IPR016039; Thiolase-like.
DR PANTHER; PTHR11877; PTHR11877; 1.
DR Pfam; PF02797; Chal_sti_synt_C; 1.
DR Pfam; PF00195; Chal_sti_synt_N; 1.
DR PIRSF; PIRSF000451; PKS_III; 1.
DR SUPFAM; SSF53901; SSF53901; 1.
PE 1: Evidence at protein level;
KW Antibiotic biosynthesis; Transferase.
FT CHAIN 1..390
FT /note="3,5-dihydroxyphenylacetyl-CoA synthase"
FT /id="PRO_0000435604"
FT ACT_SITE 173
FT /evidence="ECO:0000250|UniProtKB:Q939X3"
SQ SEQUENCE 390 AA; 41526 MW; 0A5AEA4943D78E8D CRC64;
MGVDLQVTVN LDHPELLDAP VLETGVLSAE GRALPTPPRP RIVGVGTAVT RTSYSQQEVL
DAFGITDRKV RSIFLNSAIE RRNLTLPPMD SDSVRVSESQ GDLLDKHKKL AIEMGAEALH
ACLKRCGAEL SDLRHLCCVT STGFLTPGLS ALLIRELGID RHCSRSDIVG MGCNAGLNAL
NVVAGWSAAH PGELAVVLCA EACSAAYTMD STMRTAVVNS LFGDGAAAVA LLAGPGGATP
ATSEGPTVLK FASCIIPEAV DAMRYDWDRT QGRFSFFLDP QIPYVVGAHA ETVVDRLLSG
TGLRRSDIGH WLVHSGGKKV IDAVVVNLGL TRHDVRHTIG VLRDQGNVSS GSFLFSYERL
LEEGITRPGE YGVLMTMGPG STIETALVQW