DPO1_MYCTO
ID DPO1_MYCTO Reviewed; 904 AA.
AC P9WNU4; L0TA70; P0A550; Q07700;
DT 16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT 16-APR-2014, sequence version 1.
DT 03-AUG-2022, entry version 42.
DE RecName: Full=DNA polymerase I;
DE Short=POL I;
DE EC=2.7.7.7;
GN Name=polA; OrderedLocusNames=MT1665;
OS Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium; Mycobacterium tuberculosis complex.
OX NCBI_TaxID=83331;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CDC 1551 / Oshkosh;
RX PubMed=12218036; DOI=10.1128/jb.184.19.5479-5490.2002;
RA Fleischmann R.D., Alland D., Eisen J.A., Carpenter L., White O.,
RA Peterson J.D., DeBoy R.T., Dodson R.J., Gwinn M.L., Haft D.H., Hickey E.K.,
RA Kolonay J.F., Nelson W.C., Umayam L.A., Ermolaeva M.D., Salzberg S.L.,
RA Delcher A., Utterback T.R., Weidman J.F., Khouri H.M., Gill J., Mikula A.,
RA Bishai W., Jacobs W.R. Jr., Venter J.C., Fraser C.M.;
RT "Whole-genome comparison of Mycobacterium tuberculosis clinical and
RT laboratory strains.";
RL J. Bacteriol. 184:5479-5490(2002).
CC -!- FUNCTION: In addition to polymerase activity, this DNA polymerase
CC exhibits 3'-5' and 5'-3' exonuclease activity. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SIMILARITY: Belongs to the DNA polymerase type-A family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AE000516; AAK45935.1; -; Genomic_DNA.
DR PIR; C70559; C70559.
DR RefSeq; WP_003408063.1; NZ_KK341227.1.
DR AlphaFoldDB; P9WNU4; -.
DR SMR; P9WNU4; -.
DR PRIDE; P9WNU4; -.
DR EnsemblBacteria; AAK45935; AAK45935; MT1665.
DR KEGG; mtc:MT1665; -.
DR PATRIC; fig|83331.31.peg.1788; -.
DR HOGENOM; CLU_004675_0_0_11; -.
DR Proteomes; UP000001020; Chromosome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR019760; DNA-dir_DNA_pol_A_CS.
DR InterPro; IPR001098; DNA-dir_DNA_pol_A_palm_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR018320; DNA_polymerase_1.
DR InterPro; IPR002298; DNA_polymerase_A.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR10133; PTHR10133; 2.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR Pfam; PF00476; DNA_pol_A; 1.
DR PRINTS; PR00868; DNAPOLI.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SMART; SM00482; POLAc; 1.
DR SUPFAM; SSF47807; SSF47807; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR SUPFAM; SSF88723; SSF88723; 1.
DR TIGRFAMs; TIGR00593; pola; 1.
DR PROSITE; PS00447; DNA_POLYMERASE_A; 1.
PE 3: Inferred from homology;
KW DNA damage; DNA repair; DNA replication; DNA-binding;
KW DNA-directed DNA polymerase; Exonuclease; Hydrolase; Nuclease;
KW Nucleotidyltransferase; Transferase.
FT CHAIN 1..904
FT /note="DNA polymerase I"
FT /id="PRO_0000427066"
FT DOMAIN 186..279
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000255"
FT DOMAIN 317..493
FT /note="3'-5' exonuclease"
FT /evidence="ECO:0000255"
SQ SEQUENCE 904 AA; 98472 MW; 1C8E560FE5F74323 CRC64;
MVTTASAPSE DRAKPTLMLL DGNSLAFRAF YALPAENFKT RGGLTTNAVY GFTAMLINLL
RDEAPTHIAA AFDVSRQTFR LQRYPEYKAN RSSTPDEFAG QIDITKEVLG ALGITVLSEP
GFEADDLIAT LATQAENEGY RVLVVTGDRD ALQLVSDDVT VLYPRKGVSE LTRFTPEAVV
EKYGLTPRQY PDFAALRGDP SDNLPGIPGV GEKTAAKWIA EYGSLRSLVD NVDAVRGKVG
DALRANLASV VRNRELTDLV RDVPLAQTPD TLRLQPWDRD HIHRLFDDLE FRVLRDRLFD
TLAAAGGPEV DEGFDVRGGA LAPGTVRQWL AEHAGDGRRA GLTVVGTHLP HGGDATAMAV
AAADGEGAYL DTATLTPDDD AALAAWLADP AKPKALHEAK AAVHDLAGRG WTLEGVTSDT
ALAAYLVRPG QRSFTLDDLS LRYLRRELRA ETPQQQQLSL LDDDDTDAET IQTTILRARA
VIDLADALDA ELARIDSTAL LGEMELPVQR VLAKMESAGI AVDLPMLTEL QSQFGDQIRD
AAEAAYGVIG KQINLGSPKQ LQVVLFDELG MPKTKRTKTG YTTDADALQS LFDKTGHPFL
QHLLAHRDVT RLKVTVDGLL QAVAADGRIH TTFNQTIAAT GRLSSTEPNL QNIPIRTDAG
RRIRDAFVVG DGYAELMTAD YSQIEMRIMA HLSGDEGLIE AFNTGEDLHS FVASRAFGVP
IDEVTGELRR RVKAMSYGLA YGLSAYGLSQ QLKISTEEAN EQMDAYFARF GGVRDYLRAV
VERARKDGYT STVLGRRRYL PELDSSNRQV REAAERAALN APIQGSAADI IKVAMIQVDK
ALNEAQLASR MLLQVHDELL FEIAPGERER VEALVRDKMG GAYPLDVPLE VSVGYGRSWD
AAAH