DPO3B_LACLM
ID DPO3B_LACLM Reviewed; 380 AA.
AC O54376; A2RH75;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Beta sliding clamp;
DE Short=Beta clamp;
DE Short=Sliding clamp;
DE AltName: Full=Beta-clamp processivity factor;
DE AltName: Full=DNA polymerase III beta sliding clamp subunit;
DE AltName: Full=DNA polymerase III subunit beta;
DE EC=2.7.7.7;
GN Name=dnaN; OrderedLocusNames=llmg_0002;
OS Lactococcus lactis subsp. cremoris (strain MG1363).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Lactococcus; Lactococcus cremoris subsp. cremoris.
OX NCBI_TaxID=416870;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9435243; DOI=10.1073/pnas.95.2.626;
RA El-Karoui M., Ehrlich S.D., Gruss A.;
RT "Identification of the lactococcal exonuclease/recombinase and its
RT modulation by the putative Chi sequence.";
RL Proc. Natl. Acad. Sci. U.S.A. 95:626-631(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MG1363;
RX PubMed=17307855; DOI=10.1128/jb.01768-06;
RA Wegmann U., O'Connell-Motherway M., Zomer A., Buist G., Shearman C.,
RA Canchaya C., Ventura M., Goesmann A., Gasson M.J., Kuipers O.P.,
RA van Sinderen D., Kok J.;
RT "The complete genome sequence of the lactic acid bacterial paradigm
RT Lactococcus lactis subsp. cremoris MG1363.";
RL J. Bacteriol. 189:3256-3270(2007).
CC -!- FUNCTION: Confers DNA tethering and processivity to DNA polymerases and
CC other proteins. Acts as a clamp, forming a ring around DNA (a reaction
CC catalyzed by the clamp-loading complex) which diffuses in an ATP-
CC independent manner freely and bidirectionally along dsDNA. Initially
CC characterized for its ability to contact the catalytic subunit of DNA
CC polymerase III (Pol III), a complex, multichain enzyme responsible for
CC most of the replicative synthesis in bacteria; Pol III exhibits 3'-5'
CC exonuclease proofreading activity. The beta chain is required for
CC initiation of replication as well as for processivity of DNA
CC replication. {ECO:0000250|UniProtKB:P0A988}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBUNIT: Forms a ring-shaped head-to-tail homodimer around DNA which
CC binds and tethers DNA polymerases and other proteins to the DNA. The
CC DNA replisome complex has a single clamp-loading complex (3 tau and 1
CC each of delta, delta', psi and chi subunits) which binds 3 Pol III
CC cores (1 core on the leading strand and 2 on the lagging strand) each
CC with a beta sliding clamp dimer. Additional proteins in the replisome
CC are other copies of gamma, psi and chi, Ssb, DNA helicase and RNA
CC primase. {ECO:0000250|UniProtKB:P0A988}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P0A988}.
CC -!- SIMILARITY: Belongs to the beta sliding clamp family. {ECO:0000305}.
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DR EMBL; U76424; AAC12964.1; -; Genomic_DNA.
DR EMBL; AM406671; CAL96610.1; -; Genomic_DNA.
DR PIR; T30306; T30306.
DR RefSeq; WP_011834121.1; NZ_WJVF01000016.1.
DR AlphaFoldDB; O54376; -.
DR SMR; O54376; -.
DR STRING; 416870.llmg_0002; -.
DR EnsemblBacteria; CAL96610; CAL96610; llmg_0002.
DR GeneID; 61108329; -.
DR KEGG; llm:llmg_0002; -.
DR eggNOG; COG0592; Bacteria.
DR HOGENOM; CLU_038149_2_0_9; -.
DR OMA; YLIMPVR; -.
DR PhylomeDB; O54376; -.
DR BioCyc; LLAC416870:LLMG_RS00010-MON; -.
DR Proteomes; UP000000364; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd00140; beta_clamp; 1.
DR InterPro; IPR001001; DNA_polIII_beta.
DR InterPro; IPR022635; DNA_polIII_beta_C.
DR InterPro; IPR022637; DNA_polIII_beta_cen.
DR InterPro; IPR022634; DNA_polIII_beta_N.
DR PANTHER; PTHR30478; PTHR30478; 1.
DR Pfam; PF00712; DNA_pol3_beta; 1.
DR Pfam; PF02767; DNA_pol3_beta_2; 1.
DR Pfam; PF02768; DNA_pol3_beta_3; 1.
DR PIRSF; PIRSF000804; DNA_pol_III_b; 1.
DR SMART; SM00480; POL3Bc; 1.
DR TIGRFAMs; TIGR00663; dnan; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA replication; DNA-binding; DNA-directed DNA polymerase;
KW Nucleotidyltransferase; Transferase.
FT CHAIN 1..380
FT /note="Beta sliding clamp"
FT /id="PRO_0000105441"
SQ SEQUENCE 380 AA; 42209 MW; 4877297F3E822644 CRC64;
MIKFSINKTA FQNALKITKQ AIGSKVTIPA LTKLKIEVEE KGITLIGSNG QISIKNFLPA
DNKDASMLIS GTGSVLLEAA FFENVVSQLP EVTLEFIEKE QKQVLLTSGK SEITLKGLDS
EIYPHLQEIS EGSSLKMKVK VLKEIFTETV FAVSTQENRP IFTGVHLETL STGELKAVAT
DSHRMSQRLL PLEDTDLKFD VILPSKSINS FKNVFTNDEE EIEIFISGSQ MLFQNETISY
YSRLIEGSYP DTNRLIPNEA DYTLDLVFDA AQLRHTMDRA RLLTVMTTNG TVKLTVSGDS
VVTTANSPEV GSVHEELTAL SKEGNDLSIS FNPEYLIDAL KVIKAPEVRI RFISNVRPFT
LQPRNEESGF VQLITPVRTN