DPO3X_MYCTU
ID DPO3X_MYCTU Reviewed; 578 AA.
AC P9WNT9; L0TF21; O69688; P63975;
DT 16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT 16-APR-2014, sequence version 1.
DT 03-AUG-2022, entry version 38.
DE RecName: Full=DNA polymerase III subunit gamma/tau;
DE EC=2.7.7.7;
GN Name=dnaX; Synonyms=dnaZX; OrderedLocusNames=Rv3721c; ORFNames=MTV025.069c;
OS Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium; Mycobacterium tuberculosis complex.
OX NCBI_TaxID=83332;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=9634230; DOI=10.1038/31159;
RA Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E.,
RA Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K.,
RA Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K.,
RA Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K.,
RA Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J.,
RA Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S.,
RA Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S.,
RA Barrell B.G.;
RT "Deciphering the biology of Mycobacterium tuberculosis from the complete
RT genome sequence.";
RL Nature 393:537-544(1998).
RN [2]
RP IDENTIFICATION AS A DRUG TARGET [LARGE SCALE ANALYSIS].
RX PubMed=19099550; DOI=10.1186/1752-0509-2-109;
RA Raman K., Yeturu K., Chandra N.;
RT "targetTB: a target identification pipeline for Mycobacterium tuberculosis
RT through an interactome, reactome and genome-scale structural analysis.";
RL BMC Syst. Biol. 2:109-109(2008).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=21969609; DOI=10.1074/mcp.m111.011627;
RA Kelkar D.S., Kumar D., Kumar P., Balakrishnan L., Muthusamy B., Yadav A.K.,
RA Shrivastava P., Marimuthu A., Anand S., Sundaram H., Kingsbury R.,
RA Harsha H.C., Nair B., Prasad T.S., Chauhan D.S., Katoch K., Katoch V.M.,
RA Kumar P., Chaerkady R., Ramachandran S., Dash D., Pandey A.;
RT "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution
RT mass spectrometry.";
RL Mol. Cell. Proteomics 10:M111.011627-M111.011627(2011).
RN [4]
RP INTERACTION WITH DNAN, SUBUNIT, AND DNA-BINDING.
RC STRAIN=H37Rv;
RX PubMed=22545130; DOI=10.1371/journal.pone.0035702;
RA Kukshal V., Khanam T., Chopra D., Singh N., Sanyal S., Ramachandran R.;
RT "M. tuberculosis sliding beta-clamp does not interact directly with the
RT NAD+-dependent DNA ligase.";
RL PLoS ONE 7:E35702-E35702(2012).
CC -!- FUNCTION: DNA polymerase III is a complex, multichain enzyme
CC responsible for most of the replicative synthesis in bacteria. This DNA
CC polymerase also exhibits 3' to 5' exonuclease activity.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBUNIT: Interacts with the beta sliding-clamp (dnaN)
CC (PubMed:22545130). DNA polymerase III contains a core (composed of
CC alpha, epsilon and theta chains) that associates with a tau subunit.
CC This core dimerizes to form the POLIII' complex. PolIII' associates
CC with the gamma complex (composed of gamma, delta, delta', psi and chi
CC chains) and with the beta chain to form the complete DNA polymerase III
CC complex (By similarity). {ECO:0000250, ECO:0000269|PubMed:22545130}.
CC -!- MISCELLANEOUS: Was identified as a high-confidence drug target.
CC -!- SIMILARITY: Belongs to the DnaX/STICHEL family. {ECO:0000305}.
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DR EMBL; AL123456; CCP46547.1; -; Genomic_DNA.
DR PIR; B70796; B70796.
DR RefSeq; NP_218238.1; NC_000962.3.
DR RefSeq; WP_003420417.1; NZ_NVQJ01000009.1.
DR AlphaFoldDB; P9WNT9; -.
DR SMR; P9WNT9; -.
DR STRING; 83332.Rv3721c; -.
DR PaxDb; P9WNT9; -.
DR DNASU; 885361; -.
DR GeneID; 885361; -.
DR KEGG; mtu:Rv3721c; -.
DR TubercuList; Rv3721c; -.
DR eggNOG; COG2812; Bacteria.
DR OMA; HVDVMEM; -.
DR PhylomeDB; P9WNT9; -.
DR Proteomes; UP000001584; Chromosome.
DR GO; GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006261; P:DNA-templated DNA replication; IBA:GO_Central.
DR CDD; cd18137; HLD_clamp_pol_III_gamma_tau; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR022754; DNA_pol_III_gamma-3.
DR InterPro; IPR012763; DNA_pol_III_sug/sutau_N.
DR InterPro; IPR045085; HLD_clamp_pol_III_gamma_tau.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF12169; DNA_pol3_gamma3; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF48019; SSF48019; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR02397; dnaX_nterm; 1.
PE 1: Evidence at protein level;
KW ATP-binding; DNA replication; DNA-directed DNA polymerase;
KW Nucleotide-binding; Nucleotidyltransferase; Reference proteome;
KW Transferase.
FT CHAIN 1..578
FT /note="DNA polymerase III subunit gamma/tau"
FT /id="PRO_0000105500"
FT REGION 389..423
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 525..559
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 535..559
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 42..49
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
SQ SEQUENCE 578 AA; 61923 MW; 3AF4CD7959B3C965 CRC64;
MALYRKYRPA SFAEVVGQEH VTAPLSVALD AGRINHAYLF SGPRGCGKTS SARILARSLN
CAQGPTANPC GVCESCVSLA PNAPGSIDVV ELDAASHGGV DDTRELRDRA FYAPVQSRYR
VFIVDEAHMV TTAGFNALLK IVEEPPEHLI FIFATTEPEK VLPTIRSRTH HYPFRLLPPR
TMRALLARIC EQEGVVVDDA VYPLVIRAGG GSPRDTLSVL DQLLAGAADT HVTYTRALGL
LGVTDVALID DAVDALAACD AAALFGAIES VIDGGHDPRR FATDLLERFR DLIVLQSVPD
AASRGVVDAP EDALDRMREQ AARIGRATLT RYAEVVQAGL GEMRGATAPR LLLEVVCARL
LLPSASDAES ALLQRVERIE TRLDMSIPAP QAVPRPSAAA AEPKHQPARE PRPVLAPTPA
SSEPTVAAVR SMWPTVRDKV RLRSRTTEVM LAGATVRALE DNTLVLTHES APLARRLSEQ
RNADVLAEAL KDALGVNWRV RCETGEPAAA ASPVGGGANV ATAKAVNPAP TANSTQRDEE
EHMLAEAGRG DPSPRRDPEE VALELLQNEL GARRIDNA