DPO3_MYCGE
ID DPO3_MYCGE Reviewed; 1451 AA.
AC P47277;
DT 01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1996, sequence version 1.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=DNA polymerase III PolC-type {ECO:0000255|HAMAP-Rule:MF_00356};
DE Short=PolIII {ECO:0000255|HAMAP-Rule:MF_00356};
DE EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_00356};
GN Name=polC {ECO:0000255|HAMAP-Rule:MF_00356}; OrderedLocusNames=MG031;
OS Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
OS (Mycoplasmoides genitalium).
OC Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.
OX NCBI_TaxID=243273;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33530 / DSM 19775 / NCTC 10195 / G37;
RX PubMed=7569993; DOI=10.1126/science.270.5235.397;
RA Fraser C.M., Gocayne J.D., White O., Adams M.D., Clayton R.A.,
RA Fleischmann R.D., Bult C.J., Kerlavage A.R., Sutton G.G., Kelley J.M.,
RA Fritchman J.L., Weidman J.F., Small K.V., Sandusky M., Fuhrmann J.L.,
RA Nguyen D.T., Utterback T.R., Saudek D.M., Phillips C.A., Merrick J.M.,
RA Tomb J.-F., Dougherty B.A., Bott K.F., Hu P.-C., Lucier T.S.,
RA Peterson S.N., Smith H.O., Hutchison C.A. III, Venter J.C.;
RT "The minimal gene complement of Mycoplasma genitalium.";
RL Science 270:397-403(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 492-567; 975-1103 AND 1111-1225.
RC STRAIN=ATCC 33530 / DSM 19775 / NCTC 10195 / G37;
RX PubMed=8253680; DOI=10.1128/jb.175.24.7918-7930.1993;
RA Peterson S.N., Hu P.-C., Bott K.F., Hutchison C.A. III;
RT "A survey of the Mycoplasma genitalium genome by using random sequencing.";
RL J. Bacteriol. 175:7918-7930(1993).
CC -!- FUNCTION: Required for replicative DNA synthesis. This DNA polymerase
CC also exhibits 3' to 5' exonuclease activity. {ECO:0000255|HAMAP-
CC Rule:MF_00356}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_00356};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00356}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-C family. PolC
CC subfamily. {ECO:0000255|HAMAP-Rule:MF_00356}.
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DR EMBL; L43967; AAC71247.1; -; Genomic_DNA.
DR EMBL; U01807; AAD12336.1; -; Genomic_DNA.
DR EMBL; U01712; AAC43185.1; -; Unassigned_DNA.
DR EMBL; U02208; AAD12500.1; -; Genomic_DNA.
DR PIR; D64203; D64203.
DR RefSeq; WP_010869296.1; NC_000908.2.
DR AlphaFoldDB; P47277; -.
DR SMR; P47277; -.
DR STRING; 243273.MG_031; -.
DR EnsemblBacteria; AAC71247; AAC71247; MG_031.
DR KEGG; mge:MG_031; -.
DR eggNOG; COG2176; Bacteria.
DR HOGENOM; CLU_003297_1_0_14; -.
DR OMA; YYAAYFT; -.
DR OrthoDB; 561611at2; -.
DR BioCyc; MGEN243273:G1GJ2-31-MON; -.
DR Proteomes; UP000000807; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.150.700; -; 2.
DR Gene3D; 2.40.50.140; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR HAMAP; MF_00356; DNApol_PolC; 1.
DR InterPro; IPR011708; DNA_pol3_alpha_NTPase_dom.
DR InterPro; IPR040982; DNA_pol3_finger.
DR InterPro; IPR029460; DNAPol_HHH.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR004013; PHP_dom.
DR InterPro; IPR003141; Pol/His_phosphatase_N.
DR InterPro; IPR004805; PolC_alpha.
DR InterPro; IPR006308; PolC_gram_pos.
DR InterPro; IPR044923; PolC_middle_finger_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR32294; PTHR32294; 1.
DR Pfam; PF07733; DNA_pol3_alpha; 2.
DR Pfam; PF17657; DNA_pol3_finger; 1.
DR Pfam; PF14579; HHH_6; 1.
DR Pfam; PF02811; PHP; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00481; POLIIIAc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR TIGRFAMs; TIGR00573; dnaq; 1.
DR TIGRFAMs; TIGR01405; polC_Gram_pos; 1.
PE 3: Inferred from homology;
KW Cytoplasm; DNA replication; DNA-directed DNA polymerase; Exonuclease;
KW Hydrolase; Nuclease; Nucleotidyltransferase; Reference proteome;
KW Transferase.
FT CHAIN 1..1451
FT /note="DNA polymerase III PolC-type"
FT /id="PRO_0000204582"
FT DOMAIN 416..575
FT /note="Exonuclease"
SQ SEQUENCE 1451 AA; 167500 MW; 2DB9E6951F41AAEF CRC64;
MVFNLENEKD KKVLALSNFL IDNNILDHNE LNSLIERIES IYFNKYIEEK VFLFAITISR
PLTIDIWNAL YEGFNELNEG FKADNESFKL TITFKENEPF FKSKNSFSSV TIAIIKDYFH
SFFSKDKKYK ILIEQELSNP NFLSYENDEL KAQCQTKELT EWLVQKSKSF IFWMNNAGFK
NFNFIALYPI DKNESKLKVK AVTVSQYDKQ FETKVFATEF IPIHKINQQI DDVKIIGQIF
ELKTHESLTG KKTLNIYVTD FQLGGSLILK WSYTDEKKIE GITIGNWIKA HIQVERDPNT
QILYGIVREI NPVEIPNNYK RLDLSKQKRV ELVFHTKMTA FDGINDIEEY AQFAKERGWK
AITVTDKDNI HIYPKFYEVA KKYDLKAIYG LEFNLTDDHI KIVHNPDNTK LSDATFVIFD
IETTGLHGRY DDVIEFSARK IKNNSEIDHQ QFFLKIDKPI PKTITEITKI TDEMLEGGID
QQQGLEKIRN YLDDCVMVAH NGINFDLPFL QTQFEKYNIK PLTNPLIDTL CLSWALNPLF
SSHTLSNICS KLKLEFDDER LHRAEYDTEA LKKVFFYFKK QLKEMGINTL TEIDQNLNKK
CQIDLMKRVF TNTAIVYVKN QRGFQNLYEM LSIALTDHNA NRPLVLASSL AKFRKSFLLT
ENPVQGDIFK AALTKPINEL EKAIEKVDFV LISQPNAYLG YTLREGLKKE LINDAIKLVI
KTATKLKKLV AVASDAYFIH PWENEYYKAI VCAKGLGGKW HRHFNNKEKE QTVPEVFLHT
TDEMLKRMSF LGEDIAYKLV VENTNKIVKL LDLNELVPTK NKLYPPVMQD SNQKLIDKTW
KQAEKRYGKN LPKLIKERIE KELNAIISNG FGIVFWISHL LVEQSVKDGY FVGPRGSIGS
SLIANLIGIS EINPLAAHYL CEQCHYFEVS DSVDDGYDLM IRDCPKCHEK ASFKGDGHNI
PFATFMGFSG DKIPDIDLNF SSEYQAKAHD YVRKLFGVNN TFRAGTIATV AEKTAYGYAR
NYFEIIKRVD LATTAEIERF KQKLIGIKRT TGQHPGGIMI FPSDHSVYEF TPCGFPADDV
ESEWKTTHFE YDALGDAILK LDILGQDDPT MLKHLADLTK INPQNIPHFD KNLISMFSSN
KPLNLKPGIV DEVTGAVGIP EFGTKFVRKI LEQTKPKDFA DLIRVSGLSH GKNVWADNAQ
KLIKSNRLTL RDVIACRDDI MLYLINKGMQ AKDAFEIMEK VRKGIKVNAK EVSLMQNCGV
EQYWINACLK INYLFPKAHA AAYVLMAWRI AWFKLYHPLS YYACLLSFKL KEHDINGFEK
GYEFIKNRLD ELNKLYRIKK IKPKEAELLT SYEVYLEMMA RNIKLQQISI QNSNARMFVE
HNGVLIAPFI TIPGMGEAVA SSIVEARNEK PFASLNDFKK RTKITKKHVE TMEQLQLFDE
FEHQDDHKLF N