DPOL_ARCFU
ID DPOL_ARCFU Reviewed; 781 AA.
AC O29753;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 120.
DE RecName: Full=DNA polymerase;
DE EC=2.7.7.7;
GN Name=pol; Synonyms=polB; OrderedLocusNames=AF_0497;
OS Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC
OS 100126 / VC-16).
OC Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae;
OC Archaeoglobus.
OX NCBI_TaxID=224325;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16;
RX PubMed=9389475; DOI=10.1038/37052;
RA Klenk H.-P., Clayton R.A., Tomb J.-F., White O., Nelson K.E., Ketchum K.A.,
RA Dodson R.J., Gwinn M.L., Hickey E.K., Peterson J.D., Richardson D.L.,
RA Kerlavage A.R., Graham D.E., Kyrpides N.C., Fleischmann R.D.,
RA Quackenbush J., Lee N.H., Sutton G.G., Gill S.R., Kirkness E.F.,
RA Dougherty B.A., McKenney K., Adams M.D., Loftus B.J., Peterson S.N.,
RA Reich C.I., McNeil L.K., Badger J.H., Glodek A., Zhou L., Overbeek R.,
RA Gocayne J.D., Weidman J.F., McDonald L.A., Utterback T.R., Cotton M.D.,
RA Spriggs T., Artiach P., Kaine B.P., Sykes S.M., Sadow P.W., D'Andrea K.P.,
RA Bowman C., Fujii C., Garland S.A., Mason T.M., Olsen G.J., Fraser C.M.,
RA Smith H.O., Woese C.R., Venter J.C.;
RT "The complete genome sequence of the hyperthermophilic, sulphate-reducing
RT archaeon Archaeoglobus fulgidus.";
RL Nature 390:364-370(1997).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family. {ECO:0000305}.
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DR EMBL; AE000782; AAB90741.1; -; Genomic_DNA.
DR PIR; A69312; A69312.
DR RefSeq; WP_010878004.1; NC_000917.1.
DR AlphaFoldDB; O29753; -.
DR SMR; O29753; -.
DR STRING; 224325.AF_0497; -.
DR PRIDE; O29753; -.
DR EnsemblBacteria; AAB90741; AAB90741; AF_0497.
DR GeneID; 24794037; -.
DR KEGG; afu:AF_0497; -.
DR eggNOG; arCOG00328; Archaea.
DR HOGENOM; CLU_000203_6_0_2; -.
DR OMA; GNQKSPY; -.
DR OrthoDB; 35869at2157; -.
DR PhylomeDB; O29753; -.
DR BRENDA; 2.7.7.7; 414.
DR Proteomes; UP000002199; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 1.10.132.60; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.90.1600.10; -; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 2.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase;
KW Nucleotidyltransferase; Reference proteome; Transferase.
FT CHAIN 1..781
FT /note="DNA polymerase"
FT /id="PRO_0000046476"
SQ SEQUENCE 781 AA; 89851 MW; 761C7B18FCC61B8B CRC64;
MERVEGWLID ADYETIGGKA VVRLWCKDDQ GIFVAYDYNF DPYFYVIGVD EDILKNAATS
TRREVIKLKS FEKAQLKTLG REVEGYIVYA HHPQHVPKLR DYLSQFGDVR EADIPFAYRY
LIDKDLACMD GIAIEGEKQG GVIRSYKIEK VERIPRMEFP ELKMLVFDCE MLSSFGMPEP
EKDPIIVISV KTNDDDEIIL TGDERKIISD FVKLIKSYDP DIIVGYNQDA FDWPYLRKRA
ERWNIPLDVG RDGSNVVFRG GRPKITGRLN VDLYDIAMRI SDIKIKKLEN VAEFLGTKIE
IADIEAKDIY RYWSRGEKEK VLNYARQDAI NTYLIAKELL PMHYELSKMI RLPVDDVTRM
GRGKQVDWLL LSEAKKIGEI APNPPEHAES YEGAFVLEPE RGLHENVACL DFASMYPSIM
IAFNISPDTY GCRDDCYEAP EVGHKFRKSP DGFFKRILRM LIEKRRELKV ELKNLSPESS
EYKLLDIKQQ TLKVLTNSFY GYMGWNLARW YCHPCAEATT AWGRHFIRTS AKIAESMGFK
VLYGDTDSIF VTKAGMTKED VDRLIDKLHE ELPIQIEVDE YYSAIFFVEK KRYAGLTEDG
RLVVKGLEVR RGDWCELAKK VQREVIEVIL KEKNPEKALS LVKDVILRIK EGKVSLEEVV
IYKGLTKKPS KYESMQAHVK AALKAREMGI IYPVSSKIGY VIVKGSGNIG DRAYPIDLIE
DFDGENLRIK TKSGIEIKKL DKDYYIDNQI IPSVLRILER FGYTEASLKG SSQMSLDSFF
S