DPOL_EBVA8
ID DPOL_EBVA8 Reviewed; 1015 AA.
AC Q1HVC1;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 13-JUN-2006, sequence version 1.
DT 23-FEB-2022, entry version 71.
DE RecName: Full=DNA polymerase catalytic subunit;
DE EC=2.7.7.7;
GN ORFNames=BALF5;
OS Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Gammaherpesvirinae; Lymphocryptovirus.
OX NCBI_TaxID=82830;
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16490228; DOI=10.1016/j.virol.2006.01.015;
RA Dolan A., Addison C., Gatherer D., Davison A.J., McGeoch D.J.;
RT "The genome of Epstein-Barr virus type 2 strain AG876.";
RL Virology 350:164-170(2006).
CC -!- FUNCTION: Replicates viral genomic DNA in the late phase of lytic
CC infection, producing long concatemeric DNA. The replication complex is
CC composed of six viral proteins: the DNA polymerase, processivity
CC factor, primase, primase-associated factor, helicase, and ssDNA-binding
CC protein (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBUNIT: Forms a complex with the major DNA-binding protein BALF2, the
CC DNA polymerase processivity factor BMRF1, and the alkaline exonuclease
CC BGLF5. Interacts with the putative helicase-primase complex composed of
CC BBLF4, BSLF1 and BBLF2/3 proteins; these interactions may coordinate
CC leading and lagging strand DNA synthesis at the replication fork (By
CC similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Host nucleus. Note=the protein is present at
CC discrete sites in nuclei, called replication compartments where viral
CC DNA replication occurs. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family. {ECO:0000305}.
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DR EMBL; DQ279927; ABB89286.1; -; Genomic_DNA.
DR RefSeq; YP_001129507.1; NC_009334.1.
DR SMR; Q1HVC1; -.
DR IntAct; Q1HVC1; 5.
DR MINT; Q1HVC1; -.
DR PRIDE; Q1HVC1; -.
DR GeneID; 5176180; -.
DR KEGG; vg:5176180; -.
DR Proteomes; UP000007639; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR Gene3D; 1.10.132.60; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.90.1600.10; -; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase; Host nucleus;
KW Nucleotidyltransferase; Reference proteome; Transferase;
KW Viral DNA replication.
FT CHAIN 1..1015
FT /note="DNA polymerase catalytic subunit"
FT /id="PRO_0000375925"
SQ SEQUENCE 1015 AA; 113432 MW; 221FC425B2542EC9 CRC64;
MSGGLFYNPF LRPNKGLLKK PDKEYLRLIP KCFQTPGAAG VVDVRGPQPP LCFYQDSLTV
VGGDEDGKGM WWRQRAQEGT ARPEADTHGS PLDFHVYDIL ETVYTHEKCA VIPSDKQGYV
VPCGIVIKLL GRRKADGASV CVNVFGQQAY FYASAPQGLD VEFAVLSALK ASTFDRRTPC
RVSVEKVTRR SIMGYGNHAG DYHKITLSHP NSVCHVATWL QDKHGCRIFE ANVDATRRFV
LDNDFVTFGW YSCRRAIPRL QHRDSYAELE YDCEVGDLSV RREDSSWPSY QALAFDIECL
GEEGFPTATN EADLILQISC VLWSTGEEAG RYRRILLTLG TCEDIEGVEV YEFPSELDML
YAFFQLIRDL SVEIVTGYNV ANFDWPYILD RARHIYSINP ASLGKIRAGG VCEVRRPHDA
GKGFLRANTK VRITGLIPID MYAVCRDKLS LSDYKLDTVA RHLLGAKKED VHYKEIPRLF
AAGPEGRRRL GMYCVQDSAL VMDLLNHFVI HVEVAEIAKI AHIPCRRVLD DGQQIRVFSC
LLAAAQKENF ILPMPSASDR DGYQGATVIQ PLSGFYNSPV LVVDFASLYP SIIQAHNLCY
STMITPGEEH RLAGLRPGED YESFRLTGGV YHFVKKHVHE SFLASLLTSW LAKRKAIKKL
LAACEDPRQR TILDKQQLAI KCTCNAVYGF TGVANGLFPC LSIAETVTLQ GRTMLERAKA
FVEALSPANL QALAPSPDAW APLNPEGQLR VIYGDTDSLF IECRGFSESE TLRFAEALAA
HTTRSLFVAP ISLEAEKTFS CLMLITKKRY VGVLTDGKTL MKGVELVRKT ACKFVQTRCR
RVLDLVLADA RVKEAASLLS HRPFQESFTQ GLPVGFLPVI DILNQAYTDL REGRVPMGEL
CFSTELSRKL SAYKSTQMPH LAVYQKFVER NEELPQIHDR IQYVFVEPKG GVKGARKTEM
AEDPAYAERH GVPVAVDHYF DKLLQGAANI LQCLFDNNSG AALSVLQNFT ARPPF