DPOL_FOWPN
ID DPOL_FOWPN Reviewed; 988 AA.
AC P21402; Q9J5C6;
DT 01-MAY-1991, integrated into UniProtKB/Swiss-Prot.
DT 29-AUG-2001, sequence version 2.
DT 29-SEP-2021, entry version 100.
DE RecName: Full=DNA polymerase;
DE EC=2.7.7.7;
GN Name=POL; OrderedLocusNames=FPV094;
OS Fowlpox virus (strain NVSL) (FPV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes;
OC Chitovirales; Poxviridae; Chordopoxvirinae; Avipoxvirus.
OX NCBI_TaxID=928301;
OH NCBI_TaxID=7742; Vertebrata.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=FP-9 / Isolate HP-444;
RX PubMed=2819823; DOI=10.1093/nar/15.16.6563;
RA Binns M.M., Stenzler L., Tomley F.M., Campbell J., Boursnell M.E.G.;
RT "Identification by a random sequencing strategy of the fowlpoxvirus DNA
RT polymerase gene, its nucleotide sequence and comparison with other viral
RT DNA polymerases.";
RL Nucleic Acids Res. 15:6563-6573(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=10729156; DOI=10.1128/jvi.74.8.3815-3831.2000;
RA Afonso C.L., Tulman E.R., Lu Z., Zsak L., Kutish G.F., Rock D.L.;
RT "The genome of fowlpox virus.";
RL J. Virol. 74:3815-3831(2000).
CC -!- FUNCTION: Catalyzes DNA synthesis. Acquires processivity by associating
CC with a heterodimeric processivity factor comprised of the viral A20 and
CC D4 proteins, thereby forming the DNA polymerase holoenzyme. Displays
CC 3'- to 5' exonuclease activity. Might participate in viral DNA
CC recombination. Does not perform translesion synthesis across an abasic
CC site (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBUNIT: Interacts with A20. Component of the Uracil-DNA
CC glycosylase(UDG)-A20-polymerase complex; A20 and UDG form a
CC heterodimeric processivity factor that associates with E9 to form the
CC processive polymerase holoenzyme (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family. {ECO:0000305}.
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DR EMBL; M31638; AAA43821.1; -; Genomic_DNA.
DR EMBL; AF198100; AAF44438.1; -; Genomic_DNA.
DR RefSeq; NP_039057.1; NC_002188.1.
DR SMR; P21402; -.
DR PRIDE; P21402; -.
DR GeneID; 1486642; -.
DR KEGG; vg:1486642; -.
DR Proteomes; UP000008597; Genome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.90.1600.10; -; 2.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR013617; DNA-dir_DNA_pol_B_vir_insert.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR013660; DNApol_B_exo_N.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF08408; DNA_pol_B_3; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR Pfam; PF08452; DNAP_B_exo_N; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase;
KW Nucleotidyltransferase; Reference proteome; Transferase;
KW Viral DNA replication.
FT CHAIN 1..988
FT /note="DNA polymerase"
FT /id="PRO_0000046535"
FT CONFLICT 840
FT /note="E -> Q (in Ref. 1; AAA43821)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 988 AA; 116661 MW; 53A3E0AD4A71A328 CRC64;
MDIRCVNWFE NKGETKYIYL KAINRESNVI FIRFNYYYHY VYDASKELEY KPNECIDLGP
FKIINIDEKL STDIRYVEPR NYYTSELVLV KDLKRNREKQ YLQEYLDITW FYLLNNITPD
GCYKIDIEHL TPIKKDCYHC DDVSKVFIQE IPIFEVKFTY LLFDIECQFD KKFPSVFVNP
ISHISCWIID KVTEYKFTLI NTDILPDKEP SILHHKDFSP KDRITYCTEI VMLLIMKKIL
EHRFDFVITF NGNNFDIRYI SGRLEILEKS FIYFSLPDAT ETVKLKIFER FVTGGTFTNK
TYHINNNNGV MFFDLYAFIQ KTERLDSYKL DSISKNIFNC NVAIKEIDDT ILTLEATVKD
NSKDKLSIFS RVLETGNYIT IGDNNVSKIV YKDINQDSFI IKVISNRDYE IGSVHNISFG
KDDVDLKDMY KNYNLEIALD MERYCIHDAC LCKYIWDYYR VPSKINAASS TYLLPQSLAL
EYRASTLIKG PLLKLLLEER VIYTRKITKV RYPYIGGKVF LPSQKTFENN VMIFDYNSLY
PNVCIYGNLS PEKLVCILLN SNKLESEINM RTIKSKYPYP EYVCVSCESR LSDYYSEIIV
YDRREKGIIP KLLEMFIGKR KEYKNLLKTA STTIESTLYD SLQYIYKIIA NSVYGLMGFS
NSTLYSYSSA KTCTTIGRNM ITYLDSIMNG AVWENDKLIL ADFPRNIFSG ETMFNKELEV
PNMNESFKFR SVYGDTDSIF SEISTKDIEK TAKIAKHLEH IINTKILHAN FKIEFEAIYT
QLILQSKKKY TTIKYLANYK PGDKPIRVNK GTSETRRDVA LFHKHMIQRY KDMLMKLLME
SKGQQEITRL ILQSLETDMI SEFTHNREFE KYLLSRKHHN NYKSATHSNF ELVKRYNLEN
TEKIEIGERY YYIYICDISL PWQKKLCNIL SYEVIADSKF YLPKDKRIFY EIYFKRIASE
VVNLLTDKTQ CMLFFSRLFG TKPVFSSD