DPOL_RCMVM
ID DPOL_RCMVM Reviewed; 1173 AA.
AC Q85428;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2001, sequence version 2.
DT 29-SEP-2021, entry version 102.
DE RecName: Full=DNA polymerase catalytic subunit;
DE EC=2.7.7.7;
GN Name=UL54;
OS Rat cytomegalovirus (strain Maastricht).
OC Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes;
OC Herpesvirales; Herpesviridae; Betaherpesvirinae; Muromegalovirus.
OX NCBI_TaxID=79700;
OH NCBI_TaxID=10114; Rattus.
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8757999; DOI=10.1099/0022-1317-77-7-1559;
RA Beuken E., Slobbe R., Bruggeman C.A., Vink C.;
RT "Cloning and sequence analysis of the genes encoding DNA polymerase,
RT glycoprotein B, ICP18.5 and major DNA-binding protein of rat
RT cytomegalovirus.";
RL J. Gen. Virol. 77:1559-1562(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND SEQUENCE REVISION.
RX PubMed=10906222; DOI=10.1128/jvi.74.16.7656-7665.2000;
RA Vink C., Beuken E., Bruggeman C.A.;
RT "Complete DNA sequence of the rat cytomegalovirus genome.";
RL J. Virol. 74:7656-7665(2000).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SUBCELLULAR LOCATION: Host nucleus.
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family. {ECO:0000305}.
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DR EMBL; AF232689; AAF99153.1; -; Genomic_DNA.
DR RefSeq; NP_064160.1; NC_002512.2.
DR SMR; Q85428; -.
DR PRIDE; Q85428; -.
DR GeneID; 940420; -.
DR KEGG; vg:940420; -.
DR Proteomes; UP000008288; Genome.
DR GO; GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR Gene3D; 1.10.132.60; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.90.1600.10; -; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase; Host nucleus;
KW Nucleotidyltransferase; Reference proteome; Transferase;
KW Viral DNA replication.
FT CHAIN 1..1173
FT /note="DNA polymerase catalytic subunit"
FT /id="PRO_0000046509"
FT REGION 554..625
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1123..1144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 576..591
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1173 AA; 130496 MW; 900199F268F95DC3 CRC64;
MDAEIFFNPY LHTKRSRRDW RAEPAADNKE SFLQIVPRGV LYDGATGLIK TQCELSPRMF
FEDREYVLDP VMVWPGLDIA ADGEAVPPCD FVFHTFDQVV SLVFAEGRGR ARRWRQHISP
AGNVIRLFGA TALGTPVCVN VFGQKSYFYC ENRPGEDLRD VIHDLADASR SPGPLSASPS
RRAPLVAVRL RPGDIPHLYR VSFNNWSMAR KVGALMVQEG RRAYEIGVDP LARFLIDRKI
PSFGWLRVGR FSRRCNGQTS TAVIELDCQV GDVVAGQPLP NWPPYRCLSF DIECMSASGA
FPQAEVLDDI VIQISCVCFV VGGSGAHRFT FAEKHLFTIG SCAPVEDVWV YTFPSEYEML
LGFFIFFNRF SPDFLTGYNI NGFDIKYLLH RMCRVYQKDA GRFTKLRRGG RFFVNSPDGS
GDAFGGRSGV IKVFCAGTVV LDMYPVCSAK TSAPNYKLDT MAERYLGQRK EDLSYKEIPV
AFLGGEEGRA RVGKYCVQDG ARQGPLNVIA YHYEAAASPN LARIPLRRVI FDGQQIRIYT
CILEECSARG MVLPSLPSSP PSSGGDGAGL EGGDGGTAGR RKKKRSGSAP DGEDEDDPEG
GDEGENGECR ENGLEKEGSQ GSASGNVGYQ GATVLAPECG YHHNPILVFD FASLYPSIIM
SNNLCYSTLL VDGSPPVPDE DVLEVVVGEA TRYRFVREHV RRSLLAELLV RWLKQRKLVR
DAMKACGDEK QRMFMDKQQL ALKVTCNAFY GFTGVAAPML PCLPIAASIT KIGRDMLLAT
SAYMERHCND VEFLVSEVGV PREAVDRDAL RVKIVYGDTD SVFVGFRGIG REVLVKVAGK
LAAAVTRDLF RDPVRLEFEK MFVSLMMICK KRYIGKVYGE NKLCMKGVDL VRRHACAFVR
SIVSEVVDVI FHDEAVSEGA MRLSEMSFEE LRRQGVPVGF FPVIRRLCDA RDDLFLDRVP
VAQLVLSSVL SQDASRYKQK NLPHLAVYRS LVERGEELPG VGDRIEYVLT CPDESKKRAP
NYEVAEDPAH VREAKIPIHA EKYFDQIVKA VTNVLLPVFP KDMPRRERFF AYVLPIRTYL
PEVFLRMSKE DRECGAYLAR ESGLGMNSFI VYGEDTCGSR VGEGPGRGEG LGVGGGEGTR
PPRKNGHARL VSGCLYGSRP FNKKDRFVTL HIE