DPOL_RSIV
ID DPOL_RSIV Reviewed; 947 AA.
AC O70736;
DT 15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 23-FEB-2022, entry version 84.
DE RecName: Full=DNA polymerase;
DE EC=2.7.7.7;
OS Red sea bream iridovirus (RSIV).
OC Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Megaviricetes;
OC Pimascovirales; Iridoviridae; Alphairidovirinae; Megalocytivirus;
OC Infectious spleen and kidney necrosis virus.
OX NCBI_TaxID=65424;
OH NCBI_TaxID=94231; Epinephelus.
OH NCBI_TaxID=8163; Lateolabrax.
OH NCBI_TaxID=8160; Seriola.
OH NCBI_TaxID=8237; Thunnus thynnus (Atlantic bluefin tuna) (Scomber thynnus).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=Ehime-1;
RA Kurita J., Nakajima K., Hirono I., Aoki T.;
RT "Polymerase chain reaction (PCR) amplification of DNA of red sea bream
RT iridovirus (RSIV).";
RL Fish Pathol. 33:17-23(1998).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family. {ECO:0000305}.
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DR EMBL; AB007366; BAA28669.1; -; Genomic_DNA.
DR SMR; O70736; -.
DR PRIDE; O70736; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR Gene3D; 1.10.132.60; -; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR Gene3D; 3.90.1600.10; -; 1.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR042087; DNA_pol_B_thumb.
DR InterPro; IPR023211; DNA_pol_palm_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase;
KW Nucleotidyltransferase; Transferase; Viral DNA replication.
FT CHAIN 1..947
FT /note="DNA polymerase"
FT /id="PRO_0000046504"
SQ SEQUENCE 947 AA; 107025 MW; 8C5EF4C31AB33195 CRC64;
MDSVYIYQWL YANYEVRGYG IALNNTVVCV RVPNFKQVVY VECTDPQHDP RSTFTQHGFR
VYETPRACSL YGAKGVGTYF AARVPNYNAM RDVQETQGPF KIHESRVSKT MEFTARAGLP
TVGWIQVSQR CVVTRTVTMA AKEYMVPNWR TDVRPAPDIE GVPPAKIVYF DIEVKSDHEN
VFPSDRDDEV IFQIGLVLCS GTTVLRTDLL SLPGRDYDAS VYQYATEGEL LHAFIAYIRE
HEVVAVCGYN IMGFDIPYII KRCARTSMLG TFKRIGWDSH RLAIEKTAGV GHAKMTYIQW
EGVLTIDLMP IIMMDHKLDS YSLDYVANHF VKAGKDPIRP RDIFHAYNTG LMARVGRYCV
KDTQLCKQLV DYLNTWVALC EMAGVCNTSI MQLFTQGQQV RVFAQIYRDC TPMDVVDKVY
VIPDGGCDSD VVSPSSYTGA YVYEPVPGVY KNVIPMDFQS LYPSIIISKN ICYSTLVDQG
GEEYAWQEHE GCEHDPQYAK QHALGVEIGV LQCNMAALPR RATQERARMR ERISEMKIQY
ASMTPSVVKC NVFSFRFTHA HEGVLPRVLR NLLESRARVR ARIKTTDDPD IRAVLDKKQL
AYKISANSVY GTMGTQRGYL PFMAGAMTTT YCGRKLIEKA AHLLKTVVGA TIVYGDTDSC
YIQLGHDRAS LDELWQMAVN ASDTVSAFFE RPVRLEFEQC IYTKFIIFTK KRYVYRAFTR
DGKQRTGSKG VMLSRRDSAM CARNTYAAIM SAILEGSADV PFIAVRMMHD MMIPGALQDD
DFVLTKSVQD IGNGDDNNHG SYKVRNPQKA QAAATQRVAP DDAEGYAIAL RQEMVKQMPA
QAQLAERMRL QGRAVVSGAR IEYVVLKHQY GVPEGALGAR LLDFERWRDM KVAYPLDRLY
YMKSVVNACD QLLVTAGYGP VCSKVYAAHL QLAYVHKQLM RRMMPTV