DPOZ_BPSHA
ID DPOZ_BPSHA Reviewed; 624 AA.
AC A0A2H5BHJ5;
DT 29-SEP-2021, integrated into UniProtKB/Swiss-Prot.
DT 28-FEB-2018, sequence version 1.
DT 03-AUG-2022, entry version 13.
DE RecName: Full=DNA polymerase DpoZ {ECO:0000303|PubMed:33926956};
GN Name=dpoZ; ORFNames=SHab15497_00037;
OS Acinetobacter phage SH-Ab 15497.
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Caudovirales; Siphoviridae.
OX NCBI_TaxID=2060946;
OH NCBI_TaxID=470; Acinetobacter baumannii.
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=31555825; DOI=10.1093/abbs/gmz094;
RA Hua Y., Xu M., Wang R., Zhang Y., Zhu Z., Guo M., He P.;
RT "Characterization and whole genome analysis of a novel bacteriophage SH-Ab
RT 15497 against multidrug resistant Acinetobacater baummanii.";
RL Acta Biochim. Biophys. Sin. 51:1079-1081(2019).
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, AND BIOPHYSICOCHEMICAL PROPERTIES.
RX PubMed=33926956; DOI=10.1126/science.abe6542;
RA Pezo V., Jaziri F., Bourguignon P.Y., Louis D., Jacobs-Sera D.,
RA Rozenski J., Pochet S., Herdewijn P., Hatfull G.F., Kaminski P.A.,
RA Marliere P.;
RT "Noncanonical DNA polymerization by aminoadenine-based siphoviruses.";
RL Science 372:520-524(2021).
CC -!- FUNCTION: DNA polymerase that preferentially incorporates the non-
CC canonical base aminoadenine/dZTP instead of adenine into the
CC synthesized DNA (PubMed:33926956). 29 times as efficient in using dZTP
CC instead of dATP as a substrate (PubMed:33926956). In addition to this
CC preference for dZTP, the phage also encodes a dATP triphosphohydrolase
CC that removes dATP and its precursor dADP from the nucleotide pool of
CC the host (PubMed:33926956). {ECO:0000269|PubMed:33926956}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; Evidence={ECO:0000269|PubMed:33926956};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=DNA(n) + dZTP = diphosphate + DNA(n)-Z; Xref=Rhea:RHEA:67728,
CC Rhea:RHEA-COMP:17339, Rhea:RHEA-COMP:17341, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:172931, ChEBI:CHEBI:172959, ChEBI:CHEBI:173112;
CC Evidence={ECO:0000269|PubMed:33926956};
CC -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC Kinetic parameters:
CC KM=1.3 uM for dZTP {ECO:0000269|PubMed:33926956};
CC KM=21.4 uM for dATP {ECO:0000269|PubMed:33926956};
CC -!- SIMILARITY: Belongs to the DNA polymerase type-A family. DpoZ
CC subfamily. {ECO:0000305}.
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DR EMBL; MG674163; AUG85479.1; -; Genomic_DNA.
DR SMR; A0A2H5BHJ5; -.
DR Proteomes; UP000241732; Genome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006261; P:DNA-templated DNA replication; IEA:InterPro.
DR GO; GO:0039693; P:viral DNA genome replication; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR001098; DNA-dir_DNA_pol_A_palm_dom.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR002298; DNA_polymerase_A.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR10133; PTHR10133; 1.
DR Pfam; PF00476; DNA_pol_A; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR PRINTS; PR00868; DNAPOLI.
DR SMART; SM00482; POLAc; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR SUPFAM; SSF56672; SSF56672; 1.
PE 1: Evidence at protein level;
KW DNA replication; DNA-directed DNA polymerase; Nucleotidyltransferase;
KW Reference proteome; Transferase; Viral DNA replication.
FT CHAIN 1..624
FT /note="DNA polymerase DpoZ"
FT /id="PRO_0000453687"
SQ SEQUENCE 624 AA; 71000 MW; C75215F333A37B8A CRC64;
MAFPNIEQYP QISVDCESTG LEWYKEDRAF GVSIYLPTGD AEYYDIRKDR NAFHWMKDNL
WKAKKIVNHN IKFDIHMLRA TGINLNPANC ECTMIRAALI DEHLLKYDLD SLLKKYLKMS
KDNDIYADLA QIFGGQPTRK VQILNLHRAP VDLVARYANI DTEGAYKLWE WQEGEIERQD
LHQVWQLERR LFRHIVEMER RGIRIDPNEA NRRAEELDRV TAETVAELNR LAGFEVNPNP
SGSIKKLFNP KQNEAGIWVA RDGTPLPKTD SGAPSLGAKS LESMTDPCAK LILKARKLNK
TKDTFIRGHV LGHAIQNGQD WFVHPNINQT KSDTGDGSEG TGTGRLSYTR PALQQIPSRD
KEIASIVRPI FLPDRGQKWS YGDLDQHEFR IFAHYANPKD IIEAYAQNPD LDMHQIVADL
TGMPRSATKA GEANAKQINL GMVFNMGAGE LASQMGLPFT IESVDFGDHV HDLKKAGPET
LEIVENYYAK VQGVKEMARK ARTIAKSRGY VRTLMGRHIR FPRGMFTYKA SGLIFQGTAG
DLNKLNICNI AEYLESECPY NRLLLNIHDE YSVSLEDDGK EIKHLKELQG LVQHRPELRV
PIRIDFSHPA PNWWLATRAD LATK