DPPB_PSEAB
ID DPPB_PSEAB Reviewed; 336 AA.
AC A0A0H2ZGW7;
DT 07-APR-2021, integrated into UniProtKB/Swiss-Prot.
DT 16-SEP-2015, sequence version 1.
DT 03-AUG-2022, entry version 34.
DE RecName: Full=Di/tripeptide transport system permease protein DppB {ECO:0000305};
GN Name=dppB {ECO:0000303|PubMed:25338022};
GN OrderedLocusNames=PA14_58440 {ECO:0000312|EMBL:ABJ13770.1};
OS Pseudomonas aeruginosa (strain UCBPP-PA14).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=208963;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UCBPP-PA14;
RX PubMed=17038190; DOI=10.1186/gb-2006-7-10-r90;
RA Lee D.G., Urbach J.M., Wu G., Liberati N.T., Feinbaum R.L., Miyata S.,
RA Diggins L.T., He J., Saucier M., Deziel E., Friedman L., Li L., Grills G.,
RA Montgomery K., Kucherlapati R., Rahme L.G., Ausubel F.M.;
RT "Genomic analysis reveals that Pseudomonas aeruginosa virulence is
RT combinatorial.";
RL Genome Biol. 7:R90.1-R90.14(2006).
RN [2]
RP FUNCTION, SUBUNIT, AND DISRUPTION PHENOTYPE.
RC STRAIN=UCBPP-PA14;
RX PubMed=25338022; DOI=10.1371/journal.pone.0111311;
RA Pletzer D., Lafon C., Braun Y., Koehler T., Page M.G., Mourez M.,
RA Weingart H.;
RT "High-throughput screening of dipeptide utilization mediated by the ABC
RT transporter DppBCDF and its substrate-binding proteins DppA1-A5 in
RT Pseudomonas aeruginosa.";
RL PLoS ONE 9:e111311-e111311(2014).
CC -!- FUNCTION: Part of the ABC transporter DppABCDF involved in the uptake
CC of various di/tripeptides (PubMed:25338022). Is also involved in the
CC uptake of phaseolotoxin, a toxic tripeptide inhibiting the enzyme
CC ornithine carbamoyltransferase (PubMed:25338022). Responsible for the
CC translocation of the substrate across the membrane (Probable).
CC {ECO:0000269|PubMed:25338022, ECO:0000305}.
CC -!- SUBUNIT: The complex is composed of two ATP-binding proteins (DppD and
CC DppF), two transmembrane proteins (DppB and DppC) and a solute-binding
CC protein (DppA1-A5) (PubMed:25338022). Five orthologous SBPs (DppA1-A5)
CC are present in P.aeruginosa, which increases the substrate specificity
CC of the DppBCDF transporter (PubMed:25338022).
CC {ECO:0000269|PubMed:25338022}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane
CC {ECO:0000250|UniProtKB:P0AEF8}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- DISRUPTION PHENOTYPE: Deletion of the dppBCDF operon leads to reduced
CC ability to utilize di/tripeptides as nitrogen source.
CC {ECO:0000269|PubMed:25338022}.
CC -!- SIMILARITY: Belongs to the binding-protein-dependent transport system
CC permease family. OppBC subfamily. {ECO:0000305}.
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DR EMBL; CP000438; ABJ13770.1; -; Genomic_DNA.
DR RefSeq; WP_003105448.1; NZ_CP034244.1.
DR AlphaFoldDB; A0A0H2ZGW7; -.
DR SMR; A0A0H2ZGW7; -.
DR EnsemblBacteria; ABJ13770; ABJ13770; PA14_58440.
DR KEGG; pau:PA14_58440; -.
DR HOGENOM; CLU_036879_0_0_6; -.
DR OMA; WPGMGTF; -.
DR BioCyc; PAER208963:G1G74-4922-MON; -.
DR Proteomes; UP000000653; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0015833; P:peptide transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR CDD; cd06261; TM_PBP2; 1.
DR Gene3D; 1.10.3720.10; -; 1.
DR InterPro; IPR045621; BPD_transp_1_N.
DR InterPro; IPR000515; MetI-like.
DR InterPro; IPR035906; MetI-like_sf.
DR Pfam; PF00528; BPD_transp_1; 1.
DR Pfam; PF19300; BPD_transp_1_N; 1.
DR SUPFAM; SSF161098; SSF161098; 1.
DR PROSITE; PS50928; ABC_TM1; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Peptide transport;
KW Protein transport; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..336
FT /note="Di/tripeptide transport system permease protein
FT DppB"
FT /id="PRO_0000452194"
FT TRANSMEM 10..30
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 102..122
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 145..165
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 198..218
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 257..277
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 307..327
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 96..325
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
SQ SEQUENCE 336 AA; 37073 MW; DDEADC2DF1740C0B CRC64;
MLSFIARRLG LLIPTFFGVT LLTFALIRLI PGDPVEVMMG ERRVDPQMHA EALHRLGLDK
PLYQQYLDYV GNLAQGNLGE SLTTREGVWH EFLTLFPATL ELSLAAMLFA GTFGLLAGVI
AALKRGSLFD HGVMTVSLAG YSMPIFWWGL ILIMLFSVSL GWTPVSGRLD LLYDIEPKTG
FMLIDTLLSD EQGSFLDAVR HLILPAIVLG TIPLAVIARM TRSAMLEVLR EDYVRTARAK
GLSPARVVFV HALRNALIPV LTVFGLQVGT LLAGAVLTET IFSWPGIGKW LIDAISRRDY
PVVQNGILLV ATLVILVNFV VDILYGLANP RIRHQR